Gene Shewmr7_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3045 
Symbol 
ID4256425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3609370 
End bp3610143 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content42% 
IMG OID638123723 
Producthypothetical protein 
Protein accessionYP_739086 
Protein GI114048536 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000132824 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.280975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTT TGGTTTCACC GGCGAAAACC CTAGATTTTG AGCAGCCTCC CTTGACTCAA 
ATTCACTCTC GGCCCGATTT TTTAACGCAT AGCCAAGAGC TAATCCAAGT CTGCCAACGG
TTAACCCCCA GTGATATAGC AACATTAATG AAGGTGAGTG ATAACATTGC GGGCTTAAAT
GCCGCGCGTT TTGGTGAGTG GAAGCCCGAT TACAGCATTG ATAATGCTAA ACAGGCGATT
TTTGCTTTTC GGGGGGATGT GTATACGGGG TTTGATGCCG ATACGTTGAC ACCTGAACAG
CTCGAACGTA CTCAGTCACA ATTGCGTATT CTATCTGGGC TCTATGGTTT ACTGCGGCCC
TTGGATTTGA TTTTACCTTA TCGCTTAGAA ATGGGGACTG CGCTGGCCAA TCCTAAAGGT
AAGAATCTCT ACGAATTTTG GGGCAATATT CTCACCGATG CGGTAAATAA TGCCGTTGCT
GAGCAAGGGG ATTATCTCAT TATTAACCTG GCATCGAATG AATATTTCAA AGCGATCAAA
CCAAAAAAAT TAGCTGGGCA ATTAATCACT CCAGTATTTA AAGATTTTAA AAATGGCCAA
TATAAAGTCA TCAGTTTTTT TGCTAAAAGA GCGAGGGGAA TGATGGCAAG ATATATCATT
GATCAGCAAG TCAGTTCGAT TGATGAATTA AAAGCGTTTG ATGTGGCAGG TTATTACTAC
AGTGAAGAAT TGAGTAAACC GAATGAGCCA ACATTCTTGC GTGAAGCGCA GTAA
 
Protein sequence
MLILVSPAKT LDFEQPPLTQ IHSRPDFLTH SQELIQVCQR LTPSDIATLM KVSDNIAGLN 
AARFGEWKPD YSIDNAKQAI FAFRGDVYTG FDADTLTPEQ LERTQSQLRI LSGLYGLLRP
LDLILPYRLE MGTALANPKG KNLYEFWGNI LTDAVNNAVA EQGDYLIINL ASNEYFKAIK
PKKLAGQLIT PVFKDFKNGQ YKVISFFAKR ARGMMARYII DQQVSSIDEL KAFDVAGYYY
SEELSKPNEP TFLREAQ