Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3045 |
Symbol | |
ID | 4256425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3609370 |
End bp | 3610143 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638123723 |
Product | hypothetical protein |
Protein accession | YP_739086 |
Protein GI | 114048536 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000132824 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.280975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATTT TGGTTTCACC GGCGAAAACC CTAGATTTTG AGCAGCCTCC CTTGACTCAA ATTCACTCTC GGCCCGATTT TTTAACGCAT AGCCAAGAGC TAATCCAAGT CTGCCAACGG TTAACCCCCA GTGATATAGC AACATTAATG AAGGTGAGTG ATAACATTGC GGGCTTAAAT GCCGCGCGTT TTGGTGAGTG GAAGCCCGAT TACAGCATTG ATAATGCTAA ACAGGCGATT TTTGCTTTTC GGGGGGATGT GTATACGGGG TTTGATGCCG ATACGTTGAC ACCTGAACAG CTCGAACGTA CTCAGTCACA ATTGCGTATT CTATCTGGGC TCTATGGTTT ACTGCGGCCC TTGGATTTGA TTTTACCTTA TCGCTTAGAA ATGGGGACTG CGCTGGCCAA TCCTAAAGGT AAGAATCTCT ACGAATTTTG GGGCAATATT CTCACCGATG CGGTAAATAA TGCCGTTGCT GAGCAAGGGG ATTATCTCAT TATTAACCTG GCATCGAATG AATATTTCAA AGCGATCAAA CCAAAAAAAT TAGCTGGGCA ATTAATCACT CCAGTATTTA AAGATTTTAA AAATGGCCAA TATAAAGTCA TCAGTTTTTT TGCTAAAAGA GCGAGGGGAA TGATGGCAAG ATATATCATT GATCAGCAAG TCAGTTCGAT TGATGAATTA AAAGCGTTTG ATGTGGCAGG TTATTACTAC AGTGAAGAAT TGAGTAAACC GAATGAGCCA ACATTCTTGC GTGAAGCGCA GTAA
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Protein sequence | MLILVSPAKT LDFEQPPLTQ IHSRPDFLTH SQELIQVCQR LTPSDIATLM KVSDNIAGLN AARFGEWKPD YSIDNAKQAI FAFRGDVYTG FDADTLTPEQ LERTQSQLRI LSGLYGLLRP LDLILPYRLE MGTALANPKG KNLYEFWGNI LTDAVNNAVA EQGDYLIINL ASNEYFKAIK PKKLAGQLIT PVFKDFKNGQ YKVISFFAKR ARGMMARYII DQQVSSIDEL KAFDVAGYYY SEELSKPNEP TFLREAQ
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