Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3041 |
Symbol | |
ID | 4256421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3605321 |
End bp | 3606880 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123719 |
Product | integral membrane protein MviN |
Protein accession | YP_739082 |
Protein GI | 114048532 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000507063 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.815511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAAAA AATTATTGAA ATCTGGCATG ATTGTTAGTG CTATGACGTT GATTTCTCGT GTTTTAGGTT TGGTTCGAGA TGTAGTTGTT GCCAATTTAA TGGGGGCAGG GACAAGCGCC GACGTTTTTT TCTTCGCCAA TAAAATTCCT AACTTTTTAC GTCGATTATT TGCCGAGGGC GCTTTTGCTC AGGCATTTGT TCCGGTACTG ACCGAATATC AGGAAAAACA CACTTCGGAC GAGACTCGAG AGTTACTCAG TAAAGTGGCG GGGACCTTAG GGCTATTGGT GACGATTGTA ACTCTTGTCG GAGTCATCGC ATCCCCCGTA TTGTCGGCCT TATTTGGTGG CGGCTGGTTT GTGGCTTGGC TTAACAATGA GCCCGATGGC GCCAAGTTTG AGCTGGCAAC CGTTGTGCTT AAAATCACCT TCCCGTATTT GTGGTTTATC ACCTTTACCG CGTTAGCAGG GTCCATCCTA AATACCCGTG GGCGGTTTGC GGTATCAGCA TTTACCCCAG TATTCTTAAA CGTGGCCATT ATTACGGCGG CGATGTTTTT TGCACCTACG TCTTCTCAGC CTGAAATTAC CTTGGCATGG GGGGTATTTT GTGGTGGTTT AATTCAGTTT TTATTCCAGA TCCCCTTCCT ACTTAGAGAA AAGGCTCTCG TTAAACCGTC ATGGGGCTGG AAACACCCTG GGGTCGTGAA GATCAGAACT CTGATGATCC CTGCGCTTTT TGGTGTGTCG GTTTCACAAA TCAATCTGTT ATTCGATACT TTTATCGCCA GCTTCCTGAT GACGGGCTCT ATCAGCTGGT TGTACTATTC GGACCGTTTA TTGGAATTTC CACTCGGTTT ATTTGGTATT GCCATTGGTA CCGTGATTTT ACCGGCTTTA TCTCGAAATC ATGTAAATGC AGAAGGTGAT GGCTTTGGTA AAACCATGGA TTGGGGCATC AAGGCGATTC TGTTATTAGG ATTACCCGCC ATGATGGGGC TGATTGTGCT CGCCCAACCT ATGTTGATGG TGCTGTTTAT GCGCGGCGCC TTCTCTATCC AAGACGTTGA GATGGCATCC TACAGCTTGA TGGCTTATGG CAGTGGTTTA CTCAGCTTTA TGCTTATTAA AGTGTTAGCG CCAGGATATT ACTCGCGCCA AGACACTAAG ACTCCTGTGC GTTACGGTAT TATCGCTATG ATTACCAACA TGGGCTTTAA CCTGATCTTT GCGATTCCCT TTGGTTATGT CGGCTTAGCG ATTGCGACAT CGATGTCAGC TTTACTGAAT GCCACTCTTT TATATCGCGG TCTACACAAG GCGGGTGTTT ACCGAATTTC TAAACCAACA ATGGTGTTTT TCCTTAAAGC CGTGGTTTCG GCAGCCTTGA TGGTGGTAGT CTTGTACTAC TTCTTACCTT CGCAATCCCA ATGGTTGGAA TGGCAGCTGG TTGGGCGTGC TAAGACTTTG ATTGGTTTGA TTGCTGTTGG CGCTATGACG TATTTACTTG GCTTGTTGGC GTTAGGAATT CGTCCTTGGT CAATGAAACG GGGAGTTTGA
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Protein sequence | MSKKLLKSGM IVSAMTLISR VLGLVRDVVV ANLMGAGTSA DVFFFANKIP NFLRRLFAEG AFAQAFVPVL TEYQEKHTSD ETRELLSKVA GTLGLLVTIV TLVGVIASPV LSALFGGGWF VAWLNNEPDG AKFELATVVL KITFPYLWFI TFTALAGSIL NTRGRFAVSA FTPVFLNVAI ITAAMFFAPT SSQPEITLAW GVFCGGLIQF LFQIPFLLRE KALVKPSWGW KHPGVVKIRT LMIPALFGVS VSQINLLFDT FIASFLMTGS ISWLYYSDRL LEFPLGLFGI AIGTVILPAL SRNHVNAEGD GFGKTMDWGI KAILLLGLPA MMGLIVLAQP MLMVLFMRGA FSIQDVEMAS YSLMAYGSGL LSFMLIKVLA PGYYSRQDTK TPVRYGIIAM ITNMGFNLIF AIPFGYVGLA IATSMSALLN ATLLYRGLHK AGVYRISKPT MVFFLKAVVS AALMVVVLYY FLPSQSQWLE WQLVGRAKTL IGLIAVGAMT YLLGLLALGI RPWSMKRGV
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