Gene Shewmr7_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3040 
Symbol 
ID4256420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3604320 
End bp3605255 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content49% 
IMG OID638123718 
ProductFMN adenylyltransferase / riboflavin kinase 
Protein accessionYP_739081 
Protein GI114048531 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00882094 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.506862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAA TCCGCGGTAT ACATAACATT TTGTCATCTC ACCATGGCTG TGTGCTGACG 
ATAGGTAATT TTGATGGCGT GCATCGCGGC CATGCACAGG TGGTTGCCAA TCTGGTGCAA
AAGGCCAAGC AGCTCTCATT ACCTCCGACA GTGATGACAT TTGAGCCTCA ACCACAGGAG
TTATTCCGTG GTGAGAATGC GCCCGCGCGT CTGAGCTTAC TGCGGGATAA AATCATCCTG
TTAGATGAGT TAGGCGTTGA ACGGTTAGTG TGTGTTAACT TCAACCGTGC CTTTGCTGAT
CAACCGGCGG AGCATTTCAT CGAAGAACTG TTGGTGCGCA AGCTCGGGGT GAAATACCTC
GTCGTTGGCG ATGACTTTTG CTTCGGTCAA GGCCGAAAAG GCAATTTTGA AATGCTGATG
CAGGCGGGAG CTCGTTATGG CTTTACCGTG GTTAGCACTC AAAGTTTTAT GGTGGGCTCG
CAACGTGTGA GTTCGACCGC GGTAAGAGAA CAATTGGCTA AAGGGAACCT AGAGCAGGCG
AGACGCCTAC TCGGTCATCC CTTTACCTTA AGCGGTCGCG TGGCCCATGG CCAAAAAATT
GGCCGAACCA TAGGTTTTCC CACCGCCAAT ATTGCCCTCA AACGCAATGT GGTGCCCGTG
CGCGGGGTGT TTGCGGTGAA ACTCTATTGG GATGAGAGCG ATATTTATGA AGGGGTTGCC
AACATTGGTT TCCGCCCGAC CGTAAATGGT CAAGTTTGTC AGCTCGAGGT GCATCTTTTT
GATTTTGAAG GTGACATTTA TGGCAAGCAT GTTGAGGTTG AGTTAGTGGC AAAACTTCGC
GATGAACAAC CCTTTGATTC ATTGGATGCA CTAAAACAAC AGATTTTGAA TGATGCAAAT
GAGGCCAGAG CTTTATTTGG TAACGATGCA GGCTGA
 
Protein sequence
MELIRGIHNI LSSHHGCVLT IGNFDGVHRG HAQVVANLVQ KAKQLSLPPT VMTFEPQPQE 
LFRGENAPAR LSLLRDKIIL LDELGVERLV CVNFNRAFAD QPAEHFIEEL LVRKLGVKYL
VVGDDFCFGQ GRKGNFEMLM QAGARYGFTV VSTQSFMVGS QRVSSTAVRE QLAKGNLEQA
RRLLGHPFTL SGRVAHGQKI GRTIGFPTAN IALKRNVVPV RGVFAVKLYW DESDIYEGVA
NIGFRPTVNG QVCQLEVHLF DFEGDIYGKH VEVELVAKLR DEQPFDSLDA LKQQILNDAN
EARALFGNDA G