| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3028 |
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| Symbol | |
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| ID | 4257578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3591787 |
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| End bp | 3592299 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638123706 |
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| Product | methylation site containing protein |
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| Protein accession | YP_739069 |
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| Protein GI | 114048519 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.811666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC TACCACATGG CTTTAGCTTG ATTGAACTCA TCACTACGGT ATCCATTTCT
ACCATTCTGT TATCGATTGG TGCTCCCTCG TTAAGCGATT TCAACACGAG ATTCAGGGCT
GATAGTAATA TCAAAGTCAT CCAGCAAACA CTGATGCTCG CCCGAAATCA TGCTATTTCC
TTCAATCGAA AAGTGACTGT CTGTGCCTTA AGCAACAATC AGTGCACATC TAACTGGCAG
CTTGGTTTAA CAGTATTTAT TGATGTTAAC AGCAATAGTC AACTCGATGG CAATGAAACG
ACTATTTTTA CCACTAACGC TTTTAATGCC AGAGATACAG TTATCTACAA TCGAACCTTA
ATTCGTTTTC AACCAGATGG TCTTGCCTCT GGTACTAATG GAACATTGAA GTATTGCCCA
TCAAGTCCCA CCAGCCCATA CTCACGAGGG ATTGTGGTAA ATCAAGCTGG CAGGGCAAGA
CTATCGACTG ATGCCAATAT CCGCTGCGGA TAA
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| Protein sequence | MKTLPHGFSL IELITTVSIS TILLSIGAPS LSDFNTRFRA DSNIKVIQQT LMLARNHAIS
FNRKVTVCAL SNNQCTSNWQ LGLTVFIDVN SNSQLDGNET TIFTTNAFNA RDTVIYNRTL
IRFQPDGLAS GTNGTLKYCP SSPTSPYSRG IVVNQAGRAR LSTDANIRCG
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