| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3024 |
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| Symbol | |
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| ID | 4257574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3585601 |
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| End bp | 3588225 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638123702 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_739065 |
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| Protein GI | 114048515 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.673188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCAT CATCCTTTAA GAAAAGTGTA CTAGCTACAA ACATTGCTAT CCTACTCGGC
AGCGCTGTTT CAATCGGAGC TGTTGCTGCA GAAGCTGAAG CCACTGCAGC TGCTGCTGAA
AATATTGAGA AAATTGAAGT TCGTGGTATG AGAGCTTCGA TGAAAGCTTC TGTTAACGAC
AAACGTTTTT CTGACTCTGT CGTTGATGCG GTAACTGCTG AAGATATCGG TAAATTCCCT
GATGGTGACG TAGGGGAGTC CTTAGGTCGT ATTCCTGGCG TTGCTGTAAA CCGTCAGTTT
GGTCAAGGAC AGCAAGTTTC TATCCGTGGC GCTTCAAGCC AATTAACGAG CACGTTACTG
AACGGCCATT CAGTTGCTTC GACTGGTTGG TTTGACCAGC AAGCGATCGA CCGTAGCTTT
AACTACAGCT TACTGCCTCC AGAAATGGTT GGTGGTATTC AAGTTTATAA ATCATCTCAA
GCAGATATCG CTGAAGGTGG TATCGGCGGT ACTGTAATTG TTAAAACTCG TAAACCTTTA
GATTTAGAGG CCAACTCAGT CTTCCTTAGT GCGAAAGGGG ATTACGGAAC CGTTTCAGAA
GAAATTGACC CACAAACTTC AGGTTTGTAC AGCTGGAAAA CAGAAGATGA GAAGTTTGGT
TTCCTAGTGG CTGGTTCTCT GGATCAAACA CAATATCAAC GTAACGGTAT TGAAACTCTG
TTAGGTTGGG GCGAGATTGT TCCTACGACT TTCCAGCAAG ACCGCGAGCG CACAGCTTTA
AACGCAGTAT TCCAATATAG ACCAACTGAT AACCTCGAGT TCGGTCTGAA TTTAATGAGC
TTACAGCTCG ATGCTAACAA CGCCAACACA TCAATTTTCT TATTCCCAAC TCAACAAGGT
GAAAATACTT GTCTTAAGGA AAATGCTGCA GGCGTATGTA CTTTAGTTGA ACACACAGGT
AACGGCGGAT TTGCTTGGGC ACAAACATGG GCTCGTAAAG CAAGTATGTC ATCAGACACT
GTGGACTTAG ATTTCGCTTA TCAGGCTGAT AACTATAAGT TAGAAGGCCG TATCGGTAAA
ACTAAAGCTG AAGGTGGTAC CGATCTTACT TCTAACTACG GTCAATCAAT TGGTAAACCA
GAAGATTTCG CAGGGACTTA CGATGCAACT GGTGATGTGA TTGACATCAA CATTGCAAAT
AACTCATTTG ATGCGGGTGA CTTCAACGGT CAATTGGAAA CAGCTGGTTG GGCATTGAAA
AAACAACCTA ACACGGACGA AGAATCATTT GCGACCTTCG ATATTACTGT TCCGGTTGAA
TTTGGCGTTA TTACCTCTAT TAAATCAGGT ATTAGCTATG CAGACCACGA TGTAACTCAA
ACGACTGAAG CTGCACAATC ATCTAATATC GTCGCAAAAG ATGCCTCTGA ATATTACTCT
GGCACTATGT CATCTGGCGC TGGTTTTACC TTACCTAAGC CAATTTTTGA CAATATGATC
AGAGATGCTT ATGGCGCTAT CGATGGCTTT ACTTTAGATA AGTCTGGTTA CGGTACACTG
CAAGAGAAAA ACTTAGCCCT GTACACTATG GCTACTTTTG CTGGTGAAGG TGTGCGTGGT
AACTTCGGTT TAAGATATAT CTCTACCGAT GTTGAGTCTG ACTACTACGC GTTTAGCCAA
ACTGGTACTT ATGCTGATGA TTTAAGTACT GATAAGGCAA GCTATCACGA TGTATTACCA
AGCATGAACA TTGCGTTTGA CTTGGCAAGT GACTTAATTT TAAGAGCATC AGCTGCACAA
GTTATTTCTC GTCCTAACTA TGCGGATCTC TTCGCGACGT CTAAGTTACC AGGTTTCAAC
GATGGTACGC CAGGCAACGA GAAGAAAGTG ACTGGTAGCG TGAATCTGCA GCCGTTCAAA
GCCTCACAGG CTGATCTGAG CTTAGAATGG TACTTCAGCG GTGAAGGATT ATTTGCTGTT
ACTTACTTCA TTAAAGATGT TAACTCTTTC ATTTCGACAA GAGAAAAGCT GAACCAACAG
ATTGGTATTG ATGATCCTAA CTTAGTTGCG CAAGGTGGCA GTTCTTGTGG TGCAGGCATT
TACGACTGCT GGACCGTCAG TGAGAACTAC AATGCTAACG GTGGTTCTAT CGATGGTATT
GAGTTGCAGT TGCAAGACTC ATTTGACAAT GGTTTTGGTT ACTCAGCTAA CTACACCTTT
GCAGATGCTT CATCTCCAGC TGAAAACTAT GCGGACCGTG TAGGGGTGTT CTCAGACTCA
TCTAAGCATA CTGTTAACTT AGTGGGTTAC TATGAAATCG ATGATTTCTC TGCTCGTGTA
GCTTATAACT GGCGTTCTGA GTACATGATG CGCGAATTAC CAGGCTTCTA CGGTAACCGC
GAGCATCAAG CCTACGGCAC GTTAGATTTA AGTGCTAACT ACGATGTAAC TGATTACTTA
TCTGTGACAT TTGAAGTGGT TAACTTACTT GAAGAAGATA GCATTCAGAA AGGTGTATCA
CCTGTTGATG CTGAAGGCGT TATCAGTGAG TTTAAAGATA ACTACCCAGT GTGGAGCTTC
GATGGTGAAG CTCGCTACAA ACTTGGTGTA GCACTGCGCT TCTAA
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| Protein sequence | MRPSSFKKSV LATNIAILLG SAVSIGAVAA EAEATAAAAE NIEKIEVRGM RASMKASVND
KRFSDSVVDA VTAEDIGKFP DGDVGESLGR IPGVAVNRQF GQGQQVSIRG ASSQLTSTLL
NGHSVASTGW FDQQAIDRSF NYSLLPPEMV GGIQVYKSSQ ADIAEGGIGG TVIVKTRKPL
DLEANSVFLS AKGDYGTVSE EIDPQTSGLY SWKTEDEKFG FLVAGSLDQT QYQRNGIETL
LGWGEIVPTT FQQDRERTAL NAVFQYRPTD NLEFGLNLMS LQLDANNANT SIFLFPTQQG
ENTCLKENAA GVCTLVEHTG NGGFAWAQTW ARKASMSSDT VDLDFAYQAD NYKLEGRIGK
TKAEGGTDLT SNYGQSIGKP EDFAGTYDAT GDVIDINIAN NSFDAGDFNG QLETAGWALK
KQPNTDEESF ATFDITVPVE FGVITSIKSG ISYADHDVTQ TTEAAQSSNI VAKDASEYYS
GTMSSGAGFT LPKPIFDNMI RDAYGAIDGF TLDKSGYGTL QEKNLALYTM ATFAGEGVRG
NFGLRYISTD VESDYYAFSQ TGTYADDLST DKASYHDVLP SMNIAFDLAS DLILRASAAQ
VISRPNYADL FATSKLPGFN DGTPGNEKKV TGSVNLQPFK ASQADLSLEW YFSGEGLFAV
TYFIKDVNSF ISTREKLNQQ IGIDDPNLVA QGGSSCGAGI YDCWTVSENY NANGGSIDGI
ELQLQDSFDN GFGYSANYTF ADASSPAENY ADRVGVFSDS SKHTVNLVGY YEIDDFSARV
AYNWRSEYMM RELPGFYGNR EHQAYGTLDL SANYDVTDYL SVTFEVVNLL EEDSIQKGVS
PVDAEGVISE FKDNYPVWSF DGEARYKLGV ALRF
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