Gene Shewmr7_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3017 
Symbol 
ID4257567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3575512 
End bp3576420 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content54% 
IMG OID638123695 
ProductATPase, BadF/BadG/BcrA/BcrD type 
Protein accessionYP_739058 
Protein GI114048508 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00939797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTAG TCCAGACAAA AGATCAACAA CTGTTTATCG GTGTTGATGG GGGTGGCAGT 
AAGTGCCGAG CCACTATCTA TACTGCGGAC GGTACCGTTA TAGGGACAGG TGTTGCTGGG
CGCGCTAATC CGCTGCATGG TCTTGCACAA ACATTTGCAT CTATTGAAGC ATCGACTCGC
CAAGCTCTGC TGGATGCGGG CATGAAGGAA ACCGATAGCC ATTTACTGGT TGCGGGCTTA
GGGCTGGCAG GAGTCAATGT GCCGCGCCTG TATCAGGACG TGATCAGCTG GCAGCATCCG
TTTGCCGCCA TGTATGTCAC TACGGATCTT CATACCGCTT GTATCGGTGC ACACCGCGGC
GCGGATGGTG CGGTGATCAT TACGGGTACA GGTTCTTGCG GTTATGCCCA TGTAGGAGAT
GACAGCTTAA GCATTGGCGG ACACGGTTTT GCGCTGGGCG ATAAGGGCAG CGGGGCTTGG
CTTGGCTTAA AAGCCGCCGA GCATGTGTTA CTCGCCCTCG ATGGCTTTGC CGCGCCGACC
GCCTTAACCA AAATGCTGTT AAACCATTTT GGGGTAAGTG ATGCCTTGGG CATCGTCGAG
CATCTCGCCG GAAAGTCTTC GAGTTGCTAT GCCGAATTGG CCAGAAGCGT ACTCGATTGC
GCAAACGCAG GTGATGACGT CGCTCGCGGG ATTGTGCAGG AAGGCGCCGA TTACATCAGT
GAAATGGCAC GCAAGCTGTT TAGCCTCAAT CCAGTGCGAT TCTCGATGAT CGGTGGCCTT
GCCGAACCGC TACAGGCCTG GCTTGGCAGC GATGTGGTGG CCAAGATATC TGAAACCTTA
GCGCCGCCAG AATTGGGTGC CATGTACTTC GCTCAGCAGC AATTTAACTC AGTCAACATT
AATGAATAA
 
Protein sequence
MGLVQTKDQQ LFIGVDGGGS KCRATIYTAD GTVIGTGVAG RANPLHGLAQ TFASIEASTR 
QALLDAGMKE TDSHLLVAGL GLAGVNVPRL YQDVISWQHP FAAMYVTTDL HTACIGAHRG
ADGAVIITGT GSCGYAHVGD DSLSIGGHGF ALGDKGSGAW LGLKAAEHVL LALDGFAAPT
ALTKMLLNHF GVSDALGIVE HLAGKSSSCY AELARSVLDC ANAGDDVARG IVQEGADYIS
EMARKLFSLN PVRFSMIGGL AEPLQAWLGS DVVAKISETL APPELGAMYF AQQQFNSVNI
NE