Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3017 |
Symbol | |
ID | 4257567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3575512 |
End bp | 3576420 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638123695 |
Product | ATPase, BadF/BadG/BcrA/BcrD type |
Protein accession | YP_739058 |
Protein GI | 114048508 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00939797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTTAG TCCAGACAAA AGATCAACAA CTGTTTATCG GTGTTGATGG GGGTGGCAGT AAGTGCCGAG CCACTATCTA TACTGCGGAC GGTACCGTTA TAGGGACAGG TGTTGCTGGG CGCGCTAATC CGCTGCATGG TCTTGCACAA ACATTTGCAT CTATTGAAGC ATCGACTCGC CAAGCTCTGC TGGATGCGGG CATGAAGGAA ACCGATAGCC ATTTACTGGT TGCGGGCTTA GGGCTGGCAG GAGTCAATGT GCCGCGCCTG TATCAGGACG TGATCAGCTG GCAGCATCCG TTTGCCGCCA TGTATGTCAC TACGGATCTT CATACCGCTT GTATCGGTGC ACACCGCGGC GCGGATGGTG CGGTGATCAT TACGGGTACA GGTTCTTGCG GTTATGCCCA TGTAGGAGAT GACAGCTTAA GCATTGGCGG ACACGGTTTT GCGCTGGGCG ATAAGGGCAG CGGGGCTTGG CTTGGCTTAA AAGCCGCCGA GCATGTGTTA CTCGCCCTCG ATGGCTTTGC CGCGCCGACC GCCTTAACCA AAATGCTGTT AAACCATTTT GGGGTAAGTG ATGCCTTGGG CATCGTCGAG CATCTCGCCG GAAAGTCTTC GAGTTGCTAT GCCGAATTGG CCAGAAGCGT ACTCGATTGC GCAAACGCAG GTGATGACGT CGCTCGCGGG ATTGTGCAGG AAGGCGCCGA TTACATCAGT GAAATGGCAC GCAAGCTGTT TAGCCTCAAT CCAGTGCGAT TCTCGATGAT CGGTGGCCTT GCCGAACCGC TACAGGCCTG GCTTGGCAGC GATGTGGTGG CCAAGATATC TGAAACCTTA GCGCCGCCAG AATTGGGTGC CATGTACTTC GCTCAGCAGC AATTTAACTC AGTCAACATT AATGAATAA
|
Protein sequence | MGLVQTKDQQ LFIGVDGGGS KCRATIYTAD GTVIGTGVAG RANPLHGLAQ TFASIEASTR QALLDAGMKE TDSHLLVAGL GLAGVNVPRL YQDVISWQHP FAAMYVTTDL HTACIGAHRG ADGAVIITGT GSCGYAHVGD DSLSIGGHGF ALGDKGSGAW LGLKAAEHVL LALDGFAAPT ALTKMLLNHF GVSDALGIVE HLAGKSSSCY AELARSVLDC ANAGDDVARG IVQEGADYIS EMARKLFSLN PVRFSMIGGL AEPLQAWLGS DVVAKISETL APPELGAMYF AQQQFNSVNI NE
|
| |