Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3016 |
Symbol | |
ID | 4257566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3574455 |
End bp | 3575453 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123694 |
Product | glutamine--fructose-6-phosphate transaminase (isomerizing) |
Protein accession | YP_739057 |
Protein GI | 114048507 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.143361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACA CTATTATGGA GCAAGAAGCT CGCACCGCGC CGCAGAAGAT TGCGGGTCAG TTAGCCGCTA ACGCCGATTT AATGCAGCAG TTAGGTGAAA AACTGCGTGC TTTCGATCCC CGTTTTGTGA TGATTGTGGG CCGTGGTTCA TCGGACCATG CGGGTGTATT TGCTAAATAT CTTTTTGAAA TCGAAGCGGG TGTACCCACC TTTGCCGCCG CGCCATCTGT GGCCAGCGTT TACGGTAAAA CCTTGAAGTT AGAAGGCGGA TTAGTGATTG TGATTTCGCA ATCTGGCCGC AGCCCTGATA TTTTAGCCCA GGCGCGTATG GCAAAAAACG CAGGCGCGTT TTGTGTGGCG TTAGTGAACG ATGAAACCGC GCCAATCAAG GATATCGTCG ATGTGGTAGT GCCGCTACGT GCTGGCGAAG AGAAAGCCGT TGCCGCAACC AAGAGCTACC TTGCAACTCT GTCGGCGATT CTACAATTAG CCTCGGCGTG GACGCAGAGC GAATCCCTCG CGGCGGCTGT TAACTCGTTA CCTCAAGCAC TGCAAACTGC GGTCGATGCT GAGCCACAAT TGACTCCAGC ATCGGTTGAA AACGTGAAAA ACTTAGTCGT GTTAGGCCGT GGTTTAGGTT ACGCCGTGTC TAAGGAAATC GCACTTAAGT TAAAAGAAGT GTGTTCTATC CATGCCGAAG CCTTTAGTAG CGCTGAGTTC CTCCATGGTC CTGTGACCTT AGTGGAGAAA AAACTCACGA TTGTGGATGT CTGCATTGGC GATGAGTCGT ACGCTAGCCA TATCGAACAG ATTGAAAATG TGAGCCAACG TGGCGCCGAT TTAGTGCATT TGAATCAAAC GTCGACGGAT ATTCACCCAC GTGTTGCGCC GTTAGCCCTG CTACAACGTT TTTATATCGA TGTGGCGGCA GTCGCGATTG CCCGTGGTAT TGACCCAGAC CAACCCGCTG GGCTGAAAAA AGTCACTCAA ACGCTGTAA
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Protein sequence | MTNTIMEQEA RTAPQKIAGQ LAANADLMQQ LGEKLRAFDP RFVMIVGRGS SDHAGVFAKY LFEIEAGVPT FAAAPSVASV YGKTLKLEGG LVIVISQSGR SPDILAQARM AKNAGAFCVA LVNDETAPIK DIVDVVVPLR AGEEKAVAAT KSYLATLSAI LQLASAWTQS ESLAAAVNSL PQALQTAVDA EPQLTPASVE NVKNLVVLGR GLGYAVSKEI ALKLKEVCSI HAEAFSSAEF LHGPVTLVEK KLTIVDVCIG DESYASHIEQ IENVSQRGAD LVHLNQTSTD IHPRVAPLAL LQRFYIDVAA VAIARGIDPD QPAGLKKVTQ TL
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