Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3013 |
Symbol | |
ID | 4256110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3570311 |
End bp | 3571609 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123691 |
Product | glucose/galactose transporter |
Protein accession | YP_739054 |
Protein GI | 114048504 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0638848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCG ATAAAAGCCA GCAGAAAAGC AGTTTTCTCC CCATGGCGAT AGTGGCAGCA CTCTTTTTCA TCCTCGGATT CGCAACGTGG TTGAATGGAT CTTTGATGCC CTATTTAAAA CAAATTTTGC AACTCAATCC CTTCCAAGCC TCGTTAATCC TGTTCTCTTT CTACATTGCA GTGACTTTTA CCGCGCTACC TTCGGCGTGG GTGATCCGTA AAGTGGGTTA TAAAAATGGT ATGGCACTGG GGATGGGCAT CATGATGCTC GCCGGCTTAC TGTTTATTCC TGCGGCTAAG ACCCAAATAT TTGGTCTGTT TTTATGTGCG CAATTAGTGA TGGGCACAGG CCAAACCCTG TTACAAACGG CGGTCAATCC CTACGTGGTT CGCCTTGGAC CGGAAGAGTC TGCCGCGGCC CGTGTGAGTG TGATGGGCAT TTTGAATAAA GGTGCGGGGG TGATTGCCCC CTTAGTTTTC TCTGCATTGA TTTTAGATAG CTTTAAAGAC CGCATTGGCA CTACGTTAAC CCAAGTGCAA ATTGATGAAA TGGCAAACAG CTTGGTTTTC CCTTACCTCG GCATGGCGAT TTTTATTGGG GTGTTGGCGC TTGCTGTTAA AAAATCTCCA CTGCCAGAAC TCTCTAATGA AGATGAAGTG GCCGAGCACA CAGATAAAGG CCAAATCAAA GCTGCCTTAT CCCATCCTAA CCTTGCATTT GGGGTTATCG CGCTATTTGT GTACGTTGCC GTTGAGGTGA TTGCCGGCGA CACTATCGGT ACCTTTGCCT TATCGCTCGG GGTTGAACAT TACGGTGTGA TGACCTCATA CACTATGGTG TGTATGGTTT TGGGTTATAC CTTAGGGATT ATCCTGATCC CTCGCTTTAT CTCTCAGCCA ACGGCACTGA TGATTTCGGC GATTCTTGGC CTATTACTGA CCCTAGCCAT ACTGTTTGGG GATAACCATT CCTACGCGAT TGCCAATGTG CTGTTAGTGC CTTTCGGCGG GGTGGCCTTG CCTGATACCT TACTCTTCAT TGCCTTCTTA GGATTAGCCA ATGCGATTGT TTGGCCTGCG GTGTGGCCTC TGGCACTGTC GGGTTTAGGT AAGCTCACCA GCACAGGTTC GGCATTACTC ATCATGGGGA TTGCGGGTGG TGCTTTCGGT CCACTGTTTT GGGGACTCAC GAGTTCGGCC ACCGATATGG GGCAGCAGGG CGGTTATATG GTGATGTTAC CTTGTTACCT GTTTATTCTC TTCTATGCCG TGAAAGGCCA TAAGATGCGT CACTGGTAA
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Protein sequence | MTLDKSQQKS SFLPMAIVAA LFFILGFATW LNGSLMPYLK QILQLNPFQA SLILFSFYIA VTFTALPSAW VIRKVGYKNG MALGMGIMML AGLLFIPAAK TQIFGLFLCA QLVMGTGQTL LQTAVNPYVV RLGPEESAAA RVSVMGILNK GAGVIAPLVF SALILDSFKD RIGTTLTQVQ IDEMANSLVF PYLGMAIFIG VLALAVKKSP LPELSNEDEV AEHTDKGQIK AALSHPNLAF GVIALFVYVA VEVIAGDTIG TFALSLGVEH YGVMTSYTMV CMVLGYTLGI ILIPRFISQP TALMISAILG LLLTLAILFG DNHSYAIANV LLVPFGGVAL PDTLLFIAFL GLANAIVWPA VWPLALSGLG KLTSTGSALL IMGIAGGAFG PLFWGLTSSA TDMGQQGGYM VMLPCYLFIL FYAVKGHKMR HW
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