Gene Shewmr7_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3012 
Symbol 
ID4256109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3569524 
End bp3570246 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content50% 
IMG OID638123690 
Producthypothetical protein 
Protein accessionYP_739053 
Protein GI114048503 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0896353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAACA ACCTAAATAA AAAGCGGCTG GCACAAGTTG TTGGGCTCGC GCTAACGACC 
AGTTTATTCT CCGGCATTGC CGCCGCAGAA GTGTCGGGGG AAATTGGCGT AACCAACGAT
TATCGCTTCC GTGGCATCTC GCAAACCGCA GGCGATCCTG CGATTCAAGG TGGTGTCGAT
TGGAGTTTTG AGTCAGGATT TTCGGTCGGC GCCTGGGCCA GTAATGTCGA CTTTGACGAG
CCAGGTTATA ACGGTCCAGA TATCGAGTAC GACTTTTATG TTGCCTACGG CGGTGACATC
AATGATAACG TCAGCTACGA CGTGACCCTC AACCGCTATA ACTATTCGGG TGAGAGTGAT
CTCGGCTATT TCGAAGTAAC GGCTGGCGTC GAGTTTAGTG GCTTTCGCGT GGCCTATTGG
TACACCAATG ATTACGGTGG CACCGATTTA GATTATCACT ACGGCGAAAT CAATTACTCC
TATGAGTTTG TTGAAAACTG GAACCTCGAT CTGCATTACG GCTACAACGT AGGCGATGCC
TTAGACGATG GTGAAGGCTT TGATAGCTAC TCGGATTATT CCGTCGGCGT ATCCACCGAA
TTTATGGGAT TTGGCCTGTC GCTCGCTTGG CTTGGCACTG ACTTGAGCGG CGATCAGAAA
GTCTCCGACG GTGTGTGGGA AAACGACGAT ACCGTTTTAG CAACAGTCAG CTACGCCTTC
TAA
 
Protein sequence
MNNNLNKKRL AQVVGLALTT SLFSGIAAAE VSGEIGVTND YRFRGISQTA GDPAIQGGVD 
WSFESGFSVG AWASNVDFDE PGYNGPDIEY DFYVAYGGDI NDNVSYDVTL NRYNYSGESD
LGYFEVTAGV EFSGFRVAYW YTNDYGGTDL DYHYGEINYS YEFVENWNLD LHYGYNVGDA
LDDGEGFDSY SDYSVGVSTE FMGFGLSLAW LGTDLSGDQK VSDGVWENDD TVLATVSYAF