Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3011 |
Symbol | |
ID | 4256108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3568972 |
End bp | 3569337 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123689 |
Product | protein of unknown function DUF861, cupin_3 |
Protein accession | YP_739052 |
Protein GI | 114048502 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.253622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA GCGTAACCTC GATCATTCGC TTTGCCAGCG CACAGTCGCC GGTGGAAAGT TATCAAGTCG CCCCAGAAAA GCGCATCTCT GGTAACCCCA CCCAGCAATT ACAGAATCAT TACTCTAGCC CCTGTAATCA ATTCCACAGT GGAATTTGGC AAAGCGAATC AGGCGCTTGG AAAATCAACT ACACTGAATA CGAGTATTGC GAGATCCTCG AAGGGACCAG CGTCATCACA GATCTTGAGG GACAGTCACA AACCTTCAGT GTCGGCGACC GATTTATTAT TCCTGCGGGT TTTCAAGGGG TGTGGCAAGT CGTTGAGCCG TGTCGCAAGG TTTATGTCAT CTTCGAACAA AAGTGA
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Protein sequence | MTMSVTSIIR FASAQSPVES YQVAPEKRIS GNPTQQLQNH YSSPCNQFHS GIWQSESGAW KINYTEYEYC EILEGTSVIT DLEGQSQTFS VGDRFIIPAG FQGVWQVVEP CRKVYVIFEQ K
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