| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3009 |
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| Symbol | |
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| ID | 4256106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3566073 |
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| End bp | 3567413 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123687 |
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| Product | beta alanine--pyruvate transaminase |
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| Protein accession | YP_739050 |
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| Protein GI | 114048500 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00260047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATT CACCCTACAA CACAACACAT GAGCATCCTT CTCTCGAACA TTATTGGATG
CCCTTTACCG CCAACCGCCA GTTTAAAGCC AGCCCTCGCC TGCTCGCCCA AGCAGAAGGC
ATGTACTACA CGGATATCAA TGGTAATAAG GTACTAGACT CAACGGCTGG CTTGTGGTGT
TGTAACGCCG GCCATGGACG CCGTGAGATC AGCGAAGCCG TTAGCAAGCA AATTCGCGAG
ATGGATTACG CACCGTCCTT CCAAATGGGT CATCCCCTCG CCTTCGAACT CGCCGAGCGG
TTAACTGAAC TCAGCCCTGA AGGACTCAAT AAGGTCTTCT TTACCAACTC GGGATCAGAG
TCCGTCGATA CCGCGCTTAA AATGGCACTC TGTTACCACA GAGCTAATGG CCAAGCGTCA
CGTACTCGCT TTATTGGCCG TGAGCTGGGC TACCATGGCG TAGGATTTGG TGGCATTTCA
GTGGGAGGCT TGAGCAATAA CCGTAAAGCC TTTAGTGGCC AACTGCTGCA AGGCGTGGAT
CACCTGCCCC ACACCTTAGA TATTCAAAAT TCAGCCTTTA GCCGTGGCTT ACCTAGCCTA
GGTGCCGAAA AAGCCGAAGT ATTAGAACAA CTCGTCACAC TCCACGGCGC CGAGAATATT
GCCGCCGTTA TCATTGAGCC CATGTCGGGT TCGGCGGGGG TGATTTTACC GCCACAGGGT
TACTTAAAGC GCCTACGGGA AATCACCCAA AAATACGGCA TCCTATTGAT TTTTGATGAG
GTGATCACTG CCTTTGGTCG CGTCGGCGCC GCCTTTGCCA GCCAGCGCTG GGGCGTTATC
CCCGACATAA TCACTACGGC CAAGGCCATT AATAATGGTT CGATCCCAAT GGGCGCCGTG
TTTGTGCAGG ATTTTATTCA CGATACCTGT ATGCAAGGCC CCACCGAACT CATCGAGTTT
TTCCACGGTT ATACCTATTC AGGGCATCCA GTAGCGGCGG CCGCGGCGCT CGCTACGCTG
TCCATCTATG AAAACGAACA GCTATTTGAA CGCAGCTTCG AACTTGAGCG TTATTTCGAG
GATGCCGTTC ACAGTCTCAA AGGTTTGCCG AATGTGATTG ATATTCGCAA CACCGGATTG
GTAGCAGGCT TCCAACTCGC GCCGAATAGT CAAGGCGTCG GTAAACGCGG TTACAGCGTG
TTCGAACATT GTTTCCATCA AGGCACGCTC GTGCGGGCGA CGGGCGATAT TATCGCCATA
TCCCCACCGT TAATCGTAGA GAAACACCAA ATAGACCAAA TAGTTAACAG CCTAAGCGAT
GGAATTCGCG CCGTAGGATG A
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| Protein sequence | MADSPYNTTH EHPSLEHYWM PFTANRQFKA SPRLLAQAEG MYYTDINGNK VLDSTAGLWC
CNAGHGRREI SEAVSKQIRE MDYAPSFQMG HPLAFELAER LTELSPEGLN KVFFTNSGSE
SVDTALKMAL CYHRANGQAS RTRFIGRELG YHGVGFGGIS VGGLSNNRKA FSGQLLQGVD
HLPHTLDIQN SAFSRGLPSL GAEKAEVLEQ LVTLHGAENI AAVIIEPMSG SAGVILPPQG
YLKRLREITQ KYGILLIFDE VITAFGRVGA AFASQRWGVI PDIITTAKAI NNGSIPMGAV
FVQDFIHDTC MQGPTELIEF FHGYTYSGHP VAAAAALATL SIYENEQLFE RSFELERYFE
DAVHSLKGLP NVIDIRNTGL VAGFQLAPNS QGVGKRGYSV FEHCFHQGTL VRATGDIIAI
SPPLIVEKHQ IDQIVNSLSD GIRAVG
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