Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3001 |
Symbol | |
ID | 4256098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3557493 |
End bp | 3558848 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123679 |
Product | L-glutamine synthetase |
Protein accession | YP_739042 |
Protein GI | 114048492 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000079724 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGC TAATCGCTTT TTTAAAAGAA CGAAAAATCA CAGAAGTCGA ATGTGTTATC AGCGATATGA CAGGTATCGC CCGCGGAAAA ATTGCCCCAG TGGATAAGTT CCTCGACGAA AAAGGCATGC GCTTACCCGA AAGCGTGTTG CTGCAAACCG TGACCGGTGA CTTTGTCGAC GATGATATTT ATTACAGCTT GCTCGACGAT GCCGACATCG ATTTTGTCTG TGTCCCCGAT GAAAATGCCG TATTTATGCT GCCTTGGACC ATTGAAGCCA CAGCGCAAGT GATCCACGAT TGCTACGACA GAATGGGCAA TCCCATCGAA TTATCGCCAC GTAACGTGTT GAAGAAAGTG CTTTCGCTAT ACGAGCAAAA AGGCTGGGAG CCAGTTATTG CACCTGAGAT GGAGTTTTAT CTTACCAGTC GTAGCGATGA CCACGATTTA CCCCTTAAGC CACCTATTGG TCGCTCGGGC AGACCCGAAG CGGGACGTCA GTCTTTCTCG ATTGATGCGG CTAACGAATA CGATCCGCTT TTCGAAGATA TGTATGACTG GTGTGAGCTG CAAGGTTTAG ATATCGATAC GCTGATCCAC GAAGACGGCC CTGCGCAAAT GGAGATTAAC TTCAGCCACG GTAATCCATT ATCTCTTGCA GATCAGGTGT TTGTATTCAA GCGTACCCTG CGTGAGGCGG CATTAAAACA CAATGTGTGC GCCACCTTTA TGGCTAAACC TGTGACCGAT GAGCCAGGCA GTGCGATGCA CATTCACCAA AGCGTGATTA ATAAGGAGAC GGGCAAAAAC ATCTTCACTA ATGAAGACGG TACTCAAAGC CCATTATTCC TGAGCTATAT CGCTGGTTTA CAAAAGTTTA TTCCTGAACT CTTGCCGTTG ATGGCGCCTA ATGCCAATTC GTTCCGTCGT TTCTTACCGG GCACCTCTGC GCCAGTAAAC TTGGAATGGG GCGTTGAGAA CAGAACCTGC GGCCTGCGAA TTCCTGAGTC ATCACCGCAA AACCGCCGCA TTGAAAACCG TATTCCAGGG GCGGATGCAA ACTGCTATTT AGCCATCGCG GCGAGCTTAC TCTGCGGTTA CATCGGTATG GTGGAAGGGT TAAAACCTTC GACACCAGTG CAGGGTAAAT CGAACGAAAG CCGTAGCAAC AATCCACATT GCCTGCCGTT AACCTTAGAA GAAGCGTTAG CGGCGATGCA AGAGAGTGAT GCCTGTAAGG AATATTTAGG TGAAGCCTTT ACCACCGGCT TTGTGGCGGT CAAACAGGCC GAGCTTGAAA ACTTTCGCCG CGTCGTGAGT TCGTGGGAGC GGGAGTTCCT GTTACTCAGT GTGTAA
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Protein sequence | MNKLIAFLKE RKITEVECVI SDMTGIARGK IAPVDKFLDE KGMRLPESVL LQTVTGDFVD DDIYYSLLDD ADIDFVCVPD ENAVFMLPWT IEATAQVIHD CYDRMGNPIE LSPRNVLKKV LSLYEQKGWE PVIAPEMEFY LTSRSDDHDL PLKPPIGRSG RPEAGRQSFS IDAANEYDPL FEDMYDWCEL QGLDIDTLIH EDGPAQMEIN FSHGNPLSLA DQVFVFKRTL REAALKHNVC ATFMAKPVTD EPGSAMHIHQ SVINKETGKN IFTNEDGTQS PLFLSYIAGL QKFIPELLPL MAPNANSFRR FLPGTSAPVN LEWGVENRTC GLRIPESSPQ NRRIENRIPG ADANCYLAIA ASLLCGYIGM VEGLKPSTPV QGKSNESRSN NPHCLPLTLE EALAAMQESD ACKEYLGEAF TTGFVAVKQA ELENFRRVVS SWEREFLLLS V
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