Gene Shewmr7_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3001 
Symbol 
ID4256098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3557493 
End bp3558848 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID638123679 
ProductL-glutamine synthetase 
Protein accessionYP_739042 
Protein GI114048492 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000079724 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC TAATCGCTTT TTTAAAAGAA CGAAAAATCA CAGAAGTCGA ATGTGTTATC 
AGCGATATGA CAGGTATCGC CCGCGGAAAA ATTGCCCCAG TGGATAAGTT CCTCGACGAA
AAAGGCATGC GCTTACCCGA AAGCGTGTTG CTGCAAACCG TGACCGGTGA CTTTGTCGAC
GATGATATTT ATTACAGCTT GCTCGACGAT GCCGACATCG ATTTTGTCTG TGTCCCCGAT
GAAAATGCCG TATTTATGCT GCCTTGGACC ATTGAAGCCA CAGCGCAAGT GATCCACGAT
TGCTACGACA GAATGGGCAA TCCCATCGAA TTATCGCCAC GTAACGTGTT GAAGAAAGTG
CTTTCGCTAT ACGAGCAAAA AGGCTGGGAG CCAGTTATTG CACCTGAGAT GGAGTTTTAT
CTTACCAGTC GTAGCGATGA CCACGATTTA CCCCTTAAGC CACCTATTGG TCGCTCGGGC
AGACCCGAAG CGGGACGTCA GTCTTTCTCG ATTGATGCGG CTAACGAATA CGATCCGCTT
TTCGAAGATA TGTATGACTG GTGTGAGCTG CAAGGTTTAG ATATCGATAC GCTGATCCAC
GAAGACGGCC CTGCGCAAAT GGAGATTAAC TTCAGCCACG GTAATCCATT ATCTCTTGCA
GATCAGGTGT TTGTATTCAA GCGTACCCTG CGTGAGGCGG CATTAAAACA CAATGTGTGC
GCCACCTTTA TGGCTAAACC TGTGACCGAT GAGCCAGGCA GTGCGATGCA CATTCACCAA
AGCGTGATTA ATAAGGAGAC GGGCAAAAAC ATCTTCACTA ATGAAGACGG TACTCAAAGC
CCATTATTCC TGAGCTATAT CGCTGGTTTA CAAAAGTTTA TTCCTGAACT CTTGCCGTTG
ATGGCGCCTA ATGCCAATTC GTTCCGTCGT TTCTTACCGG GCACCTCTGC GCCAGTAAAC
TTGGAATGGG GCGTTGAGAA CAGAACCTGC GGCCTGCGAA TTCCTGAGTC ATCACCGCAA
AACCGCCGCA TTGAAAACCG TATTCCAGGG GCGGATGCAA ACTGCTATTT AGCCATCGCG
GCGAGCTTAC TCTGCGGTTA CATCGGTATG GTGGAAGGGT TAAAACCTTC GACACCAGTG
CAGGGTAAAT CGAACGAAAG CCGTAGCAAC AATCCACATT GCCTGCCGTT AACCTTAGAA
GAAGCGTTAG CGGCGATGCA AGAGAGTGAT GCCTGTAAGG AATATTTAGG TGAAGCCTTT
ACCACCGGCT TTGTGGCGGT CAAACAGGCC GAGCTTGAAA ACTTTCGCCG CGTCGTGAGT
TCGTGGGAGC GGGAGTTCCT GTTACTCAGT GTGTAA
 
Protein sequence
MNKLIAFLKE RKITEVECVI SDMTGIARGK IAPVDKFLDE KGMRLPESVL LQTVTGDFVD 
DDIYYSLLDD ADIDFVCVPD ENAVFMLPWT IEATAQVIHD CYDRMGNPIE LSPRNVLKKV
LSLYEQKGWE PVIAPEMEFY LTSRSDDHDL PLKPPIGRSG RPEAGRQSFS IDAANEYDPL
FEDMYDWCEL QGLDIDTLIH EDGPAQMEIN FSHGNPLSLA DQVFVFKRTL REAALKHNVC
ATFMAKPVTD EPGSAMHIHQ SVINKETGKN IFTNEDGTQS PLFLSYIAGL QKFIPELLPL
MAPNANSFRR FLPGTSAPVN LEWGVENRTC GLRIPESSPQ NRRIENRIPG ADANCYLAIA
ASLLCGYIGM VEGLKPSTPV QGKSNESRSN NPHCLPLTLE EALAAMQESD ACKEYLGEAF
TTGFVAVKQA ELENFRRVVS SWEREFLLLS V