| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2994 |
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| Symbol | |
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| ID | 4256305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3548314 |
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| End bp | 3549591 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638123672 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_739035 |
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| Protein GI | 114048485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.235499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA CCAATGATTC ATTGATGGCA CGTCGCCAAG CCGCAGTCGC AGGCGGTGTT
GGTCAAATTC ATCCTGTTTT TACTGCTCGC GCCGAAAACG CGACCGTGTG GGATGTTGAA
GGTCGAGAGT TTATCGATTT TGCGGGTGGT ATTGCGGTGC TTAACACTGG GCATTTACAT
CCTAAGGTGA AGGCGGCTGT TGCGGCGCAG CTTGAGGACT TCTCCCACAC CTGTTTTATG
GTGCTTGGCT ATGAAAGTTA TATTCAAGTC TGTGAGAAAC TGAATCAGTT AGTGCCGGGG
GATTTTGCCA AGAAGACGGC CTTATTCACC AGCGGCTCAG AAGCGGTTGA AAACGCGGTT
AAAGTGGCTC GTGCATACAC TAAGCGGGCG GGTGTGATTG CCTTTACCTC GGGTTACCAT
GGTCGCACTA TGGCGGCGCT GGCATTAACG GGAAAGGTCG CGCCTTACAG TAAAGGTATG
GGATTAATGT CGGCTAATGT GTTCCGCGCC GAGTTCCCCT GTGCGCTGCA CGGCGTGTCA
GATGATGATG CGATGGCCTC TATCGAACGT ATCTTTAAAA ACGATGCCGA GCCGAGCGAT
ATCGCGGCCA TCATCCTTGA GCCAGTGCAG GGTGAGGGTG GATTCTATGC TGCATCGCCA
GCCTTTATGC AGCGTTTACG CGCGCTTTGC GACCGTGAAG GCATAATGTT GATTGCCGAT
GAAGTGCAAA CGGGGGCGGG TCGCACCGGG ACCTTCTTCG CCATGGAGCA AATGGGTGTA
AGCGCCGATA TCACCACCTT TGCTAAATCC ATTGCTGGTG GTTTCCCCCT TTCAGGTATT
ACGGGTAAAG CTGAAGTCAT GGATGCCATC GGTCCCGGCG GCCTTGGCGG CACCTACGGC
GGTAATCCGC TGGCCTGTGC GGCGGCGCTC GCCGTACTTG AGGTGTTTGA AGAGGAAAAG
CTGCTTGAAC GTGCCAATGC AATTGGCGAG CGGATTAAGT CGGCGCTAAA CACTATGCAG
GTTGAACATC CTCAAATCGC CGATGTGCGT GGTCTAGGGG CGATGATCGC CATTGAATTG
ATGGAGGATG GTAAACCTGC GCCTCAGTAC TGTGCCCAAA TCTTAGCCGA GGCCAGAAAC
CGAGGATTGA TCCTCCTTTC CTGTGGCACC TACGGCAACG TGCTGCGTAT TTTGGTGCCA
TTGACAGTGC CAGACGAGCA GCTCGGTGCG GGGCTGGGCA TTCTTAAAGC CTGCTTCGAT
GCTGTGTTAA AAGGTTAA
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| Protein sequence | MSTTNDSLMA RRQAAVAGGV GQIHPVFTAR AENATVWDVE GREFIDFAGG IAVLNTGHLH
PKVKAAVAAQ LEDFSHTCFM VLGYESYIQV CEKLNQLVPG DFAKKTALFT SGSEAVENAV
KVARAYTKRA GVIAFTSGYH GRTMAALALT GKVAPYSKGM GLMSANVFRA EFPCALHGVS
DDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD
EVQTGAGRTG TFFAMEQMGV SADITTFAKS IAGGFPLSGI TGKAEVMDAI GPGGLGGTYG
GNPLACAAAL AVLEVFEEEK LLERANAIGE RIKSALNTMQ VEHPQIADVR GLGAMIAIEL
MEDGKPAPQY CAQILAEARN RGLILLSCGT YGNVLRILVP LTVPDEQLGA GLGILKACFD
AVLKG
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