| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2993 |
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| Symbol | |
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| ID | 4256304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3547212 |
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| End bp | 3548255 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123671 |
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| Product | luciferase family protein |
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| Protein accession | YP_739034 |
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| Protein GI | 114048484 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.11529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAT CATCCACTTC AACATCAGCA GCCCCCGTAT CTCAGGCAAA GTCTCCCCTG
GCGGATATTC CCTTTTCACT CTTAGAACTC GCCCCCGTAC GTCAAGGCGC CAGCATCGGA
GACACGCTAC GCGCCAGCCT GCAATACGCT AAGGTTGCCG ATGACTTAGG TTTTAATCGC
TTCTGGTTTG CCGAGCATCA CAATATGCCT GGTATTGCCA GCGCCGCGAC ATCGGTGTTA
ATTGGATTTA TTGCCGAGAA TACTAAACAC ATTCGCGTCG GCGCTGGCGG TATTATGCTG
CCCAACCATG CACCGCTAGT GGTTGCCGAG CAGTTTGGTA CGCTCGAGAG TCTTTATCCC
GGACGTATCG ATTTAGGACT TGGCCGCGCA CCAGGGAGCG ATCAAATCAC CAGCCGCGCC
CTTAACCGCG ATATGAGCCG AGCGGAACAA TTTCCCGCAG AGGTCAGCGA GCTGCAAACC
TTGCTCGGTG ACTACAATGG CCATCATCCC GTGAGAGCGA TTCCCGGCGA AGGCACCCAT
GTGCCCATTT GGTTACTCGG CTCTAGCCTC TTTAGCGCCC AGCTCGCGGC ACAGCGTGGC
TTACCCTATG TATTTGCAGG GCATTTTGCA CCAAGGTTCC TCTACGATGC GATTGAGATT
TACCGCCGCG ACTTTAAGCC ATCTAAGGTA TTGGATAAGC CCTATGTGAT GCTTGGCCTG
CCGCTAATCG CCACCGAGAC AGACGCCGAG GCCGAATACT TAAGCACCAC ATCCAAACAG
CGAATACTCG CGCTTATTCG CGGTGAACCG CTGTGGTTAA AGCCACCCGT GGACAGCATG
GATGGCCTGT GGAGCGAGCA GGAAAAAGCC TATGTCGATA ACTTCTTAGG GCTATCAGTG
ACGGGCGGCC CCACCACTAT CAAGCATCAG TTGGAGATGA TAGTGAAGGA GCTGGGTGTC
GATGAGTTTA TCTTTACCAA CGATTTGTAC GATCAGCAAA AACGCGAACG AGCGCTACAG
ATCTTAATGG ATATCAAAAG CTAA
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| Protein sequence | MSISSTSTSA APVSQAKSPL ADIPFSLLEL APVRQGASIG DTLRASLQYA KVADDLGFNR
FWFAEHHNMP GIASAATSVL IGFIAENTKH IRVGAGGIML PNHAPLVVAE QFGTLESLYP
GRIDLGLGRA PGSDQITSRA LNRDMSRAEQ FPAEVSELQT LLGDYNGHHP VRAIPGEGTH
VPIWLLGSSL FSAQLAAQRG LPYVFAGHFA PRFLYDAIEI YRRDFKPSKV LDKPYVMLGL
PLIATETDAE AEYLSTTSKQ RILALIRGEP LWLKPPVDSM DGLWSEQEKA YVDNFLGLSV
TGGPTTIKHQ LEMIVKELGV DEFIFTNDLY DQQKRERALQ ILMDIKS
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