Gene Shewmr7_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2980 
Symbol 
ID4256291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3531962 
End bp3532228 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content44% 
IMG OID638123657 
Productmajor outer membrane lipoprotein, putative 
Protein accessionYP_739021 
Protein GI114048471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000253296 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0290676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA AAGTACTGAT GATTGCTGGT TTAGCAATGA CTGCCCTACT AGGTGGTTGT 
GCAAACACTA CTGCTCTGGA AGAAAGCGTT GCAACTCTGG GCAACAAAGT TGATCAATTA
TCAGCTGATG TTAGCTCTCT GAAATCAGAG CAAAGCAAAC TGTCTGCAGA CGTTAAAGAT
GCTAAAGCAG CAGCTATGGA CGCACAAGCA GAAGCTAAGC GCGCTAACGA CCGTCTAGAC
AACGTTGCTT CTCGTTACAA GAAGTAA
 
Protein sequence
MNKKVLMIAG LAMTALLGGC ANTTALEESV ATLGNKVDQL SADVSSLKSE QSKLSADVKD 
AKAAAMDAQA EAKRANDRLD NVASRYKK