| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2978 |
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| Symbol | |
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| ID | 4255655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3528614 |
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| End bp | 3530302 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123655 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_739019 |
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| Protein GI | 114048469 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.111666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0445873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGG CCTTTTATGG ACTCAGTGAT AACCCTTTTT CGATTGCACC CAATCCTCAT
TATTTATTCT TGAGTGACAG ACACAGAGAA GCCTTAGCTC ATCTGACCTA TGGACTAGGT
GAGACTGGGG GATTTGTGTT ATTGACGGGG GAGGTTGGTA CGGGTAAAAC GACAGTATCT
CGTTGTTTAC TTGGGCAATT GCCCGACCAT ACCGACACGG CATTTATTTT AAATCCTTCG
CTGACTGAGT TGGAACTCCT CGCCACACTC TGTGATGAAT TGAAGATTAG CTATGGTGAA
AACCCAACCC TTAAACAGTT AACCGATCAT CTAAGCCGTT TTTTGCTGGC CAATCATGAG
AAAGGCCGCA ATACCGTACT CATTATCGAT GAGGCGCAGC ATCTGCGTGC CGAAGTATTA
GAGCAATTAA GGCTGCTGAC GAACCTTGAG ACCGACACCA AAAAACTGCT GCAGGTGATC
TTAATTGGCC AGCCTGAGTT GCAATTGCTA CTTAAACGTC AAGAGCTGCG ACAATTAGCC
CAGCGGATCA CCGCGCGTTA TCATCTACTG CCACTCAATG AAGATGAAAT AGCGCTCTAT
GTGTTGCACC GTTTACAGGT TGCAGGTCGT TTCGAACCGC TATTTACCCG CAAAGCAATT
AAAGTGCTGC ACAAATACAG TGGCGGCATT CCGCGGTTAA TTAACTTGTT GTGTGAGCGT
GCGCTGATGG CGGGTTACGC ACAATCTAAG GTACCAATCG ATCACCATAT GGTGAGACAA
GCGGCGGCCG AAGTATTAGG CGAAGAAGAA CCACAGCAAA ATAAACTCTT GTGGCCGAGC
GCTATTGCGG CGGCATTAGT TGTGGCTTTC GGCGTGTCTT ATTGGCTATT TACCGAAAGC
CCTGCGGTTG CCAATGTGGC CAACTCGCCT GTGACACAAG TGAGCCAAAC GACACCTGCA
GTGACTCAAG CAGCGACTCC AAATAACAGT ATTCAGCCGG AGCAAACACT GGCTGCGACC
CAGAGTTCGC CAGTGGCTAG TGAGCCGCAA ACGCTTGCGG CGCCGGATCC GAGTGTGCGG
GTGTTGCAGG AGGCCATCAA ACAAAGTCGC AGTATTGATA CTGCCTTTGC AGGCCTCTTT
AATGTATGGG GCAAGGTCCC CTTTAAAGGC TTAACTGCAT GTCAGTCGGC GCTGGAGCAG
GGGCTTTCCT GCTATCAGCA GCAGGGCAAT TGGATGTCGC TCACAAGGCT CAATTATCCC
GCGGTTGTGT ATTTAGTGGA TGATAACCAA CAAGATTTTT ATGGTGCTGT GATTGCTGTC
GATGGTGAGC AGCTATTAAT GCAGTTGGGC GAGCAGCAGC TTTGGGTCGA TAGAGCCTGG
TTCAATCAAC ACTTTAGCGG CACCTTTGAA ATTCTCTGGC AGGCACCTAA TTTGCCTATG
CTGGAAATCA GCCATAAGTC GAGTCCAGGA CAATTACAAT GGCTTGAAAA TGCCCTTGCT
CATGTGGCTA ACCGACCTTC GCGCCGGGTG TCTCAATTCG ATCTGAAATT AGAGAACGAT
CTTAAAGCCT TCCAAAGCCA GCATGGTTTA AAGGCCGATG GTATTGCAGG TAATCAAACC
TTAGTGAGAC TGAATTTGTA TTTAAGCGAT CAGGGACCGC GCCTCACCGA TAATGGAGCG
CAGAGTTAA
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| Protein sequence | MYKAFYGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS
RCLLGQLPDH TDTAFILNPS LTELELLATL CDELKISYGE NPTLKQLTDH LSRFLLANHE
KGRNTVLIID EAQHLRAEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQLL LKRQELRQLA
QRITARYHLL PLNEDEIALY VLHRLQVAGR FEPLFTRKAI KVLHKYSGGI PRLINLLCER
ALMAGYAQSK VPIDHHMVRQ AAAEVLGEEE PQQNKLLWPS AIAAALVVAF GVSYWLFTES
PAVANVANSP VTQVSQTTPA VTQAATPNNS IQPEQTLAAT QSSPVASEPQ TLAAPDPSVR
VLQEAIKQSR SIDTAFAGLF NVWGKVPFKG LTACQSALEQ GLSCYQQQGN WMSLTRLNYP
AVVYLVDDNQ QDFYGAVIAV DGEQLLMQLG EQQLWVDRAW FNQHFSGTFE ILWQAPNLPM
LEISHKSSPG QLQWLENALA HVANRPSRRV SQFDLKLEND LKAFQSQHGL KADGIAGNQT
LVRLNLYLSD QGPRLTDNGA QS
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