Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2972 |
Symbol | |
ID | 4255649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3520224 |
End bp | 3521030 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638123649 |
Product | hypothetical protein |
Protein accession | YP_739013 |
Protein GI | 114048463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.101016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000399933 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCAAATT ATCATCGTTG GCTAGATCGG CTGCAAGTCA TGGATCTAAA GTATCGTCCA TCGACCAAGT ATTTATTGTC GTTAGTCTTA GTGGCATTTC TGTTAGGCGC TTGGGTAAGC TTTATTGTGC TCAACAGTGA CGAGCCCGTC GTTAAGCATA TTGGCGGCGG TAAACTGCAA CGTGTCACCG CGGAACTTGA GGCGCAAACC CAAGAACTTG CGACACGTAA TTTAGAATTA TCTGTCGAGC GTGAAGCCAA TGCGCAAATG CAGGATATGT TTGCGCAGCA GATGAAAAAA CAAAAAGAGC TAGAGCGCGA ATTAGCCTTT TATCGCAGTA TTATGTCGCC GGATGACAAT GCCGAAGGGG TGGCCATACA CGGTTTAGAA ATGACGCCGG GCGCCTTGGC GGATGAATAC AATTTCAAAC TGATTTTGAC TCAACTGCAA AAACGTAAGC AGGCGATTCA AGGTCGTACC GAAATCACCC TTATCGGTGT GCAAGACGGA AAATCCGTTG AGTTAAGTGT GAACAAACTC ACGGGTTCTA AGCTCGAGTT TGATTTTCGC TATTTTCAGG TCATAGATAC CAAAGTGAGT GTGCCTGCGG GATTTAACCT AGTGCAGGTT AAAGTCAAAG TTGTGGTGCC TTCGAGCCGC TGGACCAAAA ATTCACAGAC AGAACATGTC TATAGTGTCC CTGAGCTTTT ACAGGGTGAA AAAGAACCGC GGGTAATACT TGAACAAAAT AGTCAGGTAA CGGATAATTT GCCCCAGAAA ACTGATGTAA GAGGTAGTAA TGACTGA
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Protein sequence | MPNYHRWLDR LQVMDLKYRP STKYLLSLVL VAFLLGAWVS FIVLNSDEPV VKHIGGGKLQ RVTAELEAQT QELATRNLEL SVEREANAQM QDMFAQQMKK QKELERELAF YRSIMSPDDN AEGVAIHGLE MTPGALADEY NFKLILTQLQ KRKQAIQGRT EITLIGVQDG KSVELSVNKL TGSKLEFDFR YFQVIDTKVS VPAGFNLVQV KVKVVVPSSR WTKNSQTEHV YSVPELLQGE KEPRVILEQN SQVTDNLPQK TDVRGSND
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