Gene Shewmr7_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2971 
Symbol 
ID4255648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3519881 
End bp3520231 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID638123648 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_739012 
Protein GI114048462 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.141042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000372349 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTGATC AAGCTGACGC AGCAATGCCT ATCAAATTTA CCGATGCGGC AGCCGCTAAG 
GTAAAGGGCT TGTTGGAAGA AGAGCAAAAT CCTGCACTTA AACTACGTGT GTACGTGACG
GGTGGTGGTT GTTCTGGATT TCAGTACGGC TTTACCTTTG ATGAAAAGGT CAACGAAGGC
GACTTCACCG TTGAGAAGCA AGGCGTCCAA TTGGTCGTCG ATCCCATGAG CTTACAATAC
CTCGTTGGCG GTGAAGTGGA TTACACTTCT GGCCTCGAAG GTTCGCGTTT CTTTGTGAAG
AACCCGAATG CGACAACGAC TTGTGGTTGT GGTGCAAGTT TCTCTGTTTA A
 
Protein sequence
MTDQADAAMP IKFTDAAAAK VKGLLEEEQN PALKLRVYVT GGGCSGFQYG FTFDEKVNEG 
DFTVEKQGVQ LVVDPMSLQY LVGGEVDYTS GLEGSRFFVK NPNATTTCGC GASFSV