Gene Shewmr7_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2968 
Symbol 
ID4255645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3518042 
End bp3518737 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID638123645 
Productaquaporin Z 
Protein accessionYP_739009 
Protein GI114048459 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0762473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000412314 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAATATGT CACAAAAAAT GGCGGCAGAA TTTTTGGGCA CTCTGTGGCT CGTTCTTGGC 
GGCTGCGGCA GCGCCGTTCT GGCGGCGGCC TTTCCAGAAG TTGGGATAGG CTTACTTGGG
GTGGCGTTAG CCTTTGGTTT AACGGTTCTG ACGATGGCGT TTGCCATTGG TCATATTTCA
GGTTGCCACT TAAACCCCGC CGTATCCTTT GGACTCTGGG CTGGCGGGCG TTTTCCGGCA
TCGGAACTGC TACCTTATAT CATTGCCCAA GTGGCGGGTG GTATTGTCGG TGCAGGCGTA
TTGTACGCCA TCGCTTCAGG GCAAGAAGGT TTTAGTCTCG CGGCGGGCTT TGCTTCTAAC
GGCTTTGGCG AACATTCGCC CGGCGGTTAC AGCATGATGT CGGTGTTGAT CTGCGAAATC
GTGATGACCT TGTTCTTTTT ATTGGTGATT TTAGGGGCGA CCGACGAGCG AGCACCTAAA
GGCTTTGCGC CTATTGCGAT TGGTCTGTGT TTAACTCTTA TCCACTTGAT CAGCATTCCC
GTGTCAAACA CCTCGGTCAA TCCGGCCCGC AGTACAGGCC CTGCGCTGTT TGTCGGCGAT
TGGGCCGTAT CGCAACTGTG GATTTTTTGG GTCGCTCCTA TCCTTGGTGC CATTCTCGCC
GGCGTGATTT ACCGTTATTT CAACGCTGCT AAGTAA
 
Protein sequence
MNMSQKMAAE FLGTLWLVLG GCGSAVLAAA FPEVGIGLLG VALAFGLTVL TMAFAIGHIS 
GCHLNPAVSF GLWAGGRFPA SELLPYIIAQ VAGGIVGAGV LYAIASGQEG FSLAAGFASN
GFGEHSPGGY SMMSVLICEI VMTLFFLLVI LGATDERAPK GFAPIAIGLC LTLIHLISIP
VSNTSVNPAR STGPALFVGD WAVSQLWIFW VAPILGAILA GVIYRYFNAA K