| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2967 |
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| Symbol | |
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| ID | 4255644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3514327 |
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| End bp | 3517350 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123644 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_739008 |
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| Protein GI | 114048458 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.325613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000074765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGAAGA AACTATTGAC CTTAGCAATA CAAGCATCAA TGTTTGGTAT TGCCCCTTCG
GTAGCCTGGG CTGCCGATCC GATTGAAGTG AATACGGTGA ATGAGAGTGC CAATCGAATT
GAAATTGAGG TCGCAGATAA GCAAGAAGCT ATTGAAAAAG TCACAGTAAC AGGGTCGCGT
ATTAAACGTG ACAGCTTTTC CCTTAGTACC CCATTACAGG GGTTAGATGC TAAAGACATC
GCCGATAGCG GTATCGGCTC ATTGGCGGAT ATTTTAGTTG ACCAAATTCC TGCATTAGCA
GAAGGCGTTA GCAGCACAAA TAGCCAATCG AGCGTACAAA ATACGGGTCT TTCAACCATT
GATTTACGTA ACTTAGGTAC AGACCGCACT CTGACCTTGA TCGATGGTCG CCGTGTGGTA
TCAAACAGTT ACAGCGGTAA CTACATCAGT CTAAGCACTA TTCCCGCGGC TATGGTCGAT
AAGGTCGAAA TCATCACTGG CGGTGCGTCG GCCGTCTATG GCTCGGATGC GATTGCCGGT
GTGGTGAACA TTATTACTCA GCAGAATAAG ACTGGCTTTG AGATAAATGC CCGTGGCGGC
GAAACCACCG AAGGTGGTGG CCGCGAAACC ACAGTGGATA TGGGCTATGG CGCTGATTTT
AATGGTGATA AAGGTTATAT CTTCGCCAGC GCCACTTACG ATAAGCAACA TGGATTATTT
GCAACCGACA GGGAAAGAGC CCTGTATGAG TCAAGTTTTG CCTACGATAA AAAGCAAATG
TGTAATGCCA TGAACACGGT CGATGGCGAT CAGTGTATGC GTGATATAAC CCGAGACGAT
TGGCGCGAGC GCAGCAACGA CATCGTTGGC GGTCGTTTTA AGTCAAATTC TTGGTGGTAC
GATGGCACTG AGCTTAAGAC CGACTTTAAA GAAGAGCGTG ACGGATACAA CGGCTACACT
ACTGGTCTGC TAAAGGTTCC TGAGGATACC TTAGCCGCAG CGGTCAAAAT GAACTATGAC
CTTAGCGACG ATGTGCGTGC CAATGTGCAA GTACAATTTA GCCGCAATAC TGCGTTTCGT
CGTACCGATG CCGAAGGCCA AGATTATAAC GATTCCGAGC TTTACATCGA TCCTGAGACT
GGCTTGCCCG GATCCATTGC TGCTGGCAGC ATTTCACCAA ATAATCCTTA TGTGCCTGCC
GAAATTGCCG CAACTGCCGG AAAGAGTATT AGCTGGGATC GCCGTTTCCA AGAAGTGGGG
CCAGTCGAGA GCGATAACGA GCGCACAACC CTACGTACTT GGGCAGGATT ACAGGGCTAT
TTATTTGATA CTTGGACCTG GGATGCCTCG ATTGGTTACG GTAAGTTCGA ACAGCGTCAA
CGCCGCAGCA ATGAGATCAG TATTCGTCGT CTGAAATATG CCCTCGATGC CGAATATGCC
GCCGATGGCA CGACTATCCA ATGCGCCAGC GAAGAGGCTA GAGCCGAGGG CTGCGTCCCA
GTGAATATCT TTGGGGAAGG TTCAATCAGC AAAGAAGGGG CTGACTATAT CCGCGCCAAT
CCCTACATCA ACACAGATAT CACACAATTC AATGCCTTAG GATTTATCTC CGGGGAATTG
TTCGAATTAC CCGCAGGTGG CGTGCAATCT GCGTTCGGTA TTGAATATCG CCGTGATAGC
CAAGCCGTCG ATACCGATAA AGCGATGCGT GGCGATGCGA TTACCTTTAA CGACGTACCG
CCATTCGAAG GGGATGTGAC AGTATGGGAA ACATTTGGTG AAGCGAATCT TCCCTTGTTA
AGGGATGAGT CTTTCGCCCA TAAGCTTGAC CTAGATTTGT CATTGCGTCT TGCTGATTAT
AGCCAGAAAA ACATTGACTT AATGTCGAGT TATCGCGCGG GTATCTTGTG GGAGCCTATC
GCAAACTATG CCCTACGTGC TAATTACTCT CGCTCGCAAC GTGCACCGAA TATTACCGAA
CTGATTTCTC CACCCCGTGG GGATTACGAC AGTATTCGCG ATATTTGTGA TGGAGTAACG
GCAACTTCAA CAGGGGCTGG GCATGATAGT TGTCGACTCG ATCCGGGTAT CGCTGCGGTC
ATAGCTAGCA CTGGTAGTTT TGAGGCGGAA AGCGGTTCTA AGTATTCACC CAATGCTGGT
AATGAAAATC TGACCGAAGA AACGGCGGAT ACCTATACCC TTGGCTTTAC CATGGCGCCC
GCCTTCCTAG AAGGCTTTAA TCTGGCGGTC GATTATTACG ATATTAAGGT TGCCGATGCC
ATTGGTTCAT TAAGCAACGA AGATATTCTG GCCGAATGTT ACAACTCCAG TAACCCCTAT
GGTGCCGATA ACGAATACTG CCAGGTCATC ACTCGTGATA CTGAAGGGCA AATCACTCAA
ATTATCCAAC AGGAGCTTAA CCTGAATGAT ATCGTCACTC GCGGTGTTGA TATTGCCATG
GCCTACGAGT GGCAGCTGGA TGGTTACGGT GAGCTAAGCT TAAAAACCAA CTGGACCCAT
GTGTTGGAAT TTAGCTCAAG TTATTATGGT GCCGATGGCC TAGTGGAAGA TGACTATGTC
GGTGAGCTTG ACAGTGGCAT TTTTGAAGAC AGAGGCGCAA TTTCATTGAC TTGGAGAAAC
GATGATTGGC GTGTACGTTG GAGCGCTAAG TATAAGAGTG CCATGGTCGA TAGCCACGAG
AGAGTCGAAG AGTGGAACGT GCTGAAGGCA AAGAACCAGG CAAAACTTGA CGCAGGTGAT
GATACTGCTG TGGCCAATCC AGAAACGCCA GCATTCCTAT TCTACAGCTC GTATATCACC
CACGATTTAT CCGTGTCTTA CACTATGGAT GTGAGCAAGG CTGAATTACG TTTATACGGT
GGTGTGCGCA ACATCTTCGA CAATCAAGGT CCTTGGGTTG CTGATACCGG TGATTTAGAC
GAAACGGGCA ATGGTAACTA CAACAGCGCC TATGGCGGTG GTGTGGGACG TTATGCTTAC
CTAGGTGCAG AGCTTAAGTT CTAA
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| Protein sequence | MKKKLLTLAI QASMFGIAPS VAWAADPIEV NTVNESANRI EIEVADKQEA IEKVTVTGSR
IKRDSFSLST PLQGLDAKDI ADSGIGSLAD ILVDQIPALA EGVSSTNSQS SVQNTGLSTI
DLRNLGTDRT LTLIDGRRVV SNSYSGNYIS LSTIPAAMVD KVEIITGGAS AVYGSDAIAG
VVNIITQQNK TGFEINARGG ETTEGGGRET TVDMGYGADF NGDKGYIFAS ATYDKQHGLF
ATDRERALYE SSFAYDKKQM CNAMNTVDGD QCMRDITRDD WRERSNDIVG GRFKSNSWWY
DGTELKTDFK EERDGYNGYT TGLLKVPEDT LAAAVKMNYD LSDDVRANVQ VQFSRNTAFR
RTDAEGQDYN DSELYIDPET GLPGSIAAGS ISPNNPYVPA EIAATAGKSI SWDRRFQEVG
PVESDNERTT LRTWAGLQGY LFDTWTWDAS IGYGKFEQRQ RRSNEISIRR LKYALDAEYA
ADGTTIQCAS EEARAEGCVP VNIFGEGSIS KEGADYIRAN PYINTDITQF NALGFISGEL
FELPAGGVQS AFGIEYRRDS QAVDTDKAMR GDAITFNDVP PFEGDVTVWE TFGEANLPLL
RDESFAHKLD LDLSLRLADY SQKNIDLMSS YRAGILWEPI ANYALRANYS RSQRAPNITE
LISPPRGDYD SIRDICDGVT ATSTGAGHDS CRLDPGIAAV IASTGSFEAE SGSKYSPNAG
NENLTEETAD TYTLGFTMAP AFLEGFNLAV DYYDIKVADA IGSLSNEDIL AECYNSSNPY
GADNEYCQVI TRDTEGQITQ IIQQELNLND IVTRGVDIAM AYEWQLDGYG ELSLKTNWTH
VLEFSSSYYG ADGLVEDDYV GELDSGIFED RGAISLTWRN DDWRVRWSAK YKSAMVDSHE
RVEEWNVLKA KNQAKLDAGD DTAVANPETP AFLFYSSYIT HDLSVSYTMD VSKAELRLYG
GVRNIFDNQG PWVADTGDLD ETGNGNYNSA YGGGVGRYAY LGAELKF
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