Gene Shewmr7_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2966 
Symbol 
ID4255643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3511406 
End bp3513811 
Gene Length2406 bp 
Protein Length801 aa 
Translation table11 
GC content49% 
IMG OID638123643 
Productglutamyl peptidase 
Protein accessionYP_739007 
Protein GI114048457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.345209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000634709 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTCGTT TAGCCTTGAT TTGCATCGGC ATGATGTTAT GTCCGATTTT TACCCCACAG 
ACCTTAGCAC AAGACTACCA AAAACCTTCC TCTGCGTTGC AGCAAACCAT TAACCACAGT
ACCAGCCTCA CGACACGGCT TTCAAACGAT CACCAATGGT TAGCATTGCT CAGCCCTATT
TCGGCTCGCA GTATTACTAC GTTGGCCATA CCAGAACAGA AACTCGCCGG GTTACGTATC
GCGGCAGAGC AATATTTACC CAGCCGTATT AGCAAACGCT ATCACCAACT CAGGCTAATT
CATATTCAAA ACAATCAGCA GCGAATGATT AGCTTGCCCG GCGGCCATGA TATTACTGAG
CTACAGTTTT CCCCCGACAG TCGCTATCTG TCCTATGTGA GCCTAACGCC AGAGGGCGGT
TACTTATATG TTTACGACAT CGTTAAAGGT CAGCATAAGC GTCTCTCGGA TGAGCGCCTT
AATGGCACCA TAAGTCTTGA CTATCAATGG GCTAACAATA CCAGCCTGCT CGCGCGTTTC
GTGATAGCAC CCGAGATCAA CACGGTTGAG ACTCAAGCTT CCATCGCCCC AAAAACTAAG
GAAACCTCGG GTAAAAATAG TCCGCAGCGC ACCTATCAAG ATCTACTGAA AACCGCCGCG
GATAAACAAC GCTTTAACCA ACTGACCACC AGTCAACTGG CAAGGGTAGA TTTAGATGGC
AAACTGACGA ACATCGCCAC ACCGAGCATT ATTAAGGAGT TTTCGGTGTC GCCCGATGGT
CAATATATCT TAACGAGTCA GCTCACCACG CCCTTCTCGA CTCAAGTAAA GTATTATGAT
TTCCCAACCT TAACAGAGAT CTACAAACTT AACGGCCAAC GGATTACGCA ATTGCACCAC
AGCCAAAGTG GTGAATCTAG ACCACAAGGA CGAGACTCAG TTTTGCCCGG CCCGCGGATG
TTCCATTGGG TTCAAGGGCA AGCCGCCACC TTGGCCTATG TCGAAGCCCA AGATAAGGGC
AATATCCAGC AAGAAACGCC ACTAAGGGAT AGCCTATGGC TGCTCGACGC GCCATTTACA
CAAAAAGCCA AACTGATCGC CAAAACCCCA TGGCGGATCC TCGATATCGA TTGGGCGGAA
AACAACATCG CCTTAGTGAC GCAGCGCAAT AGCAAAGCAC AGTTACTACG ACTCAGCAGC
CTAGACTCAA GTATTGGACA AAGCTCGTTA CATACCTTGA ACGAACGCAA TCAGCGCGAT
AAATATCAAG AACTTGGCTC ATTCCCAAGG CTATATTCCC AAGGTAAAGG GCAAGTGGTT
CGCCTGCAGC AGCAAGCACA AACCACAGCG CTACTCCACT ACGGCCAAGG GGCGTCCCCT
CAGGGCGATA AGCCATTTTT AAAACGCACC TCACTCGCTA CAGGCGAATC ATCACTGTTA
TGGCAGTCTG CAACCAACCA ATTGGAGTCA GTGCGCTATG TGCTCAATCT TGAGCCCTTA
CAGCTGATTA TTAACCGTGA AAGCCCTACG GAGCCACCGA GTCTTGTCTT AATCGATGCC
ACGAAGGAAA GCCTCCTCTA CCAACAAACC GATGGACTGA GTGCATATCG GGGCATGCAA
AAGCAACTTG TCACCTACAA CAGAGCCGAT GGTGTTCCCC TATCTGGCAC ACTCTACTTA
CCCGCCAATT ACACTAAGGC GCAAGGTACC TTACCCGTGT TGATGTGGGC TTATCCGCGG
GAATTTAACG ATCCCGATGT TGCTGGCCAA ATTAGTTTTA GCGCCAATCA ATATCCCACT
ATCAGCCCTA GAGGCCCGAT CCCGCTTGTC GCCGAAGGCT TTGCGGTGTT TGATAAAGTC
TCTATGCCCA TCATAGCCCT TGGGGATAAA GAGCCCAATG ATAGCTTTCG CGAACAACTC
GTTGCCAACG CCCAAGCGGC TATCGATACC TTGGTCGATT TAGGCATTGC CGATCGCAAA
CAAATCGCGG TGGGCGGACA TTCCTATGGG GCCTTTATGG TCGCAAATTT GCTCGCCCAT
ACGGATTTGT TTTATGCCGG TATTGCCCGT AGCGGGGCTT ACAACCGCAG TCTCACTCCT
TTTGGTTTCC AAAATGAGGA GCGTTATTAC TGGCAAGCCA ATGATATATA TCAGCAAATG
TCTCCATTTA ATTATGCTGA TAAAATCAAA TCGCCTTTAC TCTTGGTTCA CGGTGAGATG
GATCAAAACT CAGGCACTTT CCCGCTGCAA TCTGAACGCC TATTCGATGC AATGCAAGGG
CTTGGCGGTA AAGCAAGGTT AGTTGTTCTG CCCTTTGAAG GACACAGTTA TGCGGCTAAG
GAATCCCTAG AACATTTGCT ATGGGAACAA AGCCAGTTCT TAAAGACAAA TCTGCCCATA
CGCTAA
 
Protein sequence
MLRLALICIG MMLCPIFTPQ TLAQDYQKPS SALQQTINHS TSLTTRLSND HQWLALLSPI 
SARSITTLAI PEQKLAGLRI AAEQYLPSRI SKRYHQLRLI HIQNNQQRMI SLPGGHDITE
LQFSPDSRYL SYVSLTPEGG YLYVYDIVKG QHKRLSDERL NGTISLDYQW ANNTSLLARF
VIAPEINTVE TQASIAPKTK ETSGKNSPQR TYQDLLKTAA DKQRFNQLTT SQLARVDLDG
KLTNIATPSI IKEFSVSPDG QYILTSQLTT PFSTQVKYYD FPTLTEIYKL NGQRITQLHH
SQSGESRPQG RDSVLPGPRM FHWVQGQAAT LAYVEAQDKG NIQQETPLRD SLWLLDAPFT
QKAKLIAKTP WRILDIDWAE NNIALVTQRN SKAQLLRLSS LDSSIGQSSL HTLNERNQRD
KYQELGSFPR LYSQGKGQVV RLQQQAQTTA LLHYGQGASP QGDKPFLKRT SLATGESSLL
WQSATNQLES VRYVLNLEPL QLIINRESPT EPPSLVLIDA TKESLLYQQT DGLSAYRGMQ
KQLVTYNRAD GVPLSGTLYL PANYTKAQGT LPVLMWAYPR EFNDPDVAGQ ISFSANQYPT
ISPRGPIPLV AEGFAVFDKV SMPIIALGDK EPNDSFREQL VANAQAAIDT LVDLGIADRK
QIAVGGHSYG AFMVANLLAH TDLFYAGIAR SGAYNRSLTP FGFQNEERYY WQANDIYQQM
SPFNYADKIK SPLLLVHGEM DQNSGTFPLQ SERLFDAMQG LGGKARLVVL PFEGHSYAAK
ESLEHLLWEQ SQFLKTNLPI R