Gene Shewmr7_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2963 
Symbol 
ID4255640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3506329 
End bp3507804 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content48% 
IMG OID638123640 
Productpeptidase M23B 
Protein accessionYP_739004 
Protein GI114048454 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00002101 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGCCA CCACAATTGA AAGTGTGTAC ACTAACGGGA TTATTCAAGC CTTAGGTTAT 
TGGTCTCGGC GTCAAATGGG AAAGGTTATA ACGTTATTTA AATTGCTGCC TAAAAAGCAT
CAAATTCTCC TCAGCATTCT TTCTGTTATC ACTACGATAA CCCTGCTCTT TCCCTCTGAA
GAAGCGCAAG CTTCAAGACA AACTCAAGGT GTTGCAGACC AAGCTCAAGT CAATACCCGT
TACGATGTTC CCTTAGCTTT TCGCTCACCA GAGCGTCCAG AAGGGGCTGA AGGTCAGCTT
CAAGATGAAT CGGCTAACGC CACGCCATTA TCTTCGGCCG ACGCCTTAGC CGCAGGCAAT
GTGCCCGCCA GCGAAACCTT AGAGAGCGCC CACCATAGGG ACGTTGAACA TTTTAATGTG
AAAAATGGCG ATACCTTAGC CGCGGTATTT GAGCGCGCGG GGCTCACCAG CAAAGATGTG
TACGAAATTA CCCAGTTGCC GCTCGCCAAA CAGAATCTAT TAAAAATCAT CCCCGGCGAA
GAAATCGTGA TATCGAAGGA TGCTAAGGGC GATTTAACCG AAGTACGCTA CCGTGTCGAT
GCGGTCTCGA CCTTAGTAAT CACTAAAGCT CAGGATAAGT ACTCCGAGAA AATCTCCGAA
AAAGACATTG AAATCCGCAC CCAATTTACC AGTGCGAAAA TCAAGAGTAA CTTCTGGAAT
GCCGCCGTCG ATGCGGGCTT AAACGCGAAC CAAATTATGC AGCTCTCGAC CGTGTTTGGC
TGGGATATCG ACTTTGCCTT GGATTTGCGT GAGGGCGACA GCTTCGCCAT TATCTATGAA
CAGGAATATG CCGAAGGCGA GTTTTTACGT AATGGCAATA TCCTTGCCGC CGAGTTTATC
AACCAGGATG AACGCTACAC CGCGGTTCGT TATACCGACG GCAACTACTA CTCCGAAAAC
GGCACTAGCA TGCGCAAGGC CTTCCTGCGC TCACCGGTCG ACTTTAAATA CGTCAGCTCC
AACTTCAACC CAAAACGTCT GCATCCAGTA ACAGGGCAAG TTAAGGCTCA CCGCGGCGTT
GACTATGTTG CCGCAATTGG TACCCCCATT AAGGCGGCGG GCAATGGCCG AGTTATCGAA
TCCGGCTACA ATCAATTTAA TGGTAACTAT GTGTTCATCA AGCACAACAA TACCTACACA
ACTAAGTATT TGCATTTGAC CAAACGCAAC GTCAGTAAAG GTGCTAGCGT TAAGCAGGGG
CAAATCATTG GCACCTTAGG CAAAACGGGG CGCGTCACAG GTGCCCATCT ACACTATGAA
TTTATCGTCA ATGGGGTGCA CCGCAATCCA AGAACGGTTG ATTTACCCAA GGCCGAATCG
ATTGCCCGTA AAGAAAGGTC CCAATTCGAT GCGCTTAGCA AACAGTTAAT GGCCAGCATT
TCACAGAACA AGCAAACCCA ATTGGCGATG CAATAA
 
Protein sequence
MLATTIESVY TNGIIQALGY WSRRQMGKVI TLFKLLPKKH QILLSILSVI TTITLLFPSE 
EAQASRQTQG VADQAQVNTR YDVPLAFRSP ERPEGAEGQL QDESANATPL SSADALAAGN
VPASETLESA HHRDVEHFNV KNGDTLAAVF ERAGLTSKDV YEITQLPLAK QNLLKIIPGE
EIVISKDAKG DLTEVRYRVD AVSTLVITKA QDKYSEKISE KDIEIRTQFT SAKIKSNFWN
AAVDAGLNAN QIMQLSTVFG WDIDFALDLR EGDSFAIIYE QEYAEGEFLR NGNILAAEFI
NQDERYTAVR YTDGNYYSEN GTSMRKAFLR SPVDFKYVSS NFNPKRLHPV TGQVKAHRGV
DYVAAIGTPI KAAGNGRVIE SGYNQFNGNY VFIKHNNTYT TKYLHLTKRN VSKGASVKQG
QIIGTLGKTG RVTGAHLHYE FIVNGVHRNP RTVDLPKAES IARKERSQFD ALSKQLMASI
SQNKQTQLAM Q