Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2961 |
Symbol | |
ID | 4257403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3504498 |
End bp | 3504926 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123638 |
Product | hypothetical protein |
Protein accession | YP_739002 |
Protein GI | 114048452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.128657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00911187 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTTGT TTGGACTGAT TGCCCTACTC GCCCTTAATG GCCTAATGCT CGCGCCCCAC GTACAGGCGC AGCAACCAAT TATCGTTTCC TACGCGGTGC AACCCGTTAG CCATTTCAAT CAGCAGTTGC GAGTAGCCCA GGAGCAACAT CAAGCCTGGA GTGAAGATCC CAAAGCTATC AGCAGCCAAT ATGCGGGTAA AAAATTTACC CTTGTCCGTA CTCAGTCAAC CAAGAATGGG ATATTTACCT ATCAAGTGAG CGAGTTGTCG CAGCAGCACC CACAAATGCT GTTAATTTTG TCGCTTAAGA AGAGTGCCCA GCGCTGGCAA GTGGATTCCG CCCAACTGGC GTGGAAGTGT CGCGATGGTC AGCATTTCGG TACCGACAGA TGTAATATCG GCGAGCATGA GGCAAGCACA GCACCTTAA
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Protein sequence | MKLFGLIALL ALNGLMLAPH VQAQQPIIVS YAVQPVSHFN QQLRVAQEQH QAWSEDPKAI SSQYAGKKFT LVRTQSTKNG IFTYQVSELS QQHPQMLLIL SLKKSAQRWQ VDSAQLAWKC RDGQHFGTDR CNIGEHEAST AP
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