| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2954 |
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| Symbol | gltB |
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| ID | 4257396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3494983 |
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| End bp | 3499431 |
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| Gene Length | 4449 bp |
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| Protein Length | 1482 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123631 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_738995 |
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| Protein GI | 114048445 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.791133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.168031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTAT ATCATCCCAG TTTTGAGCGG GACAATTGTG GTTTTGGCTT GATTGCACAA
ATGGATGGCG AAGCCAGCCA TCGTATCGTG CGCACCGCCA TCCATGGCCT CGATCGCATG
AAACACCGTG GCGGTATCGC CTCTGACGGT CGAACTGGGG ACGGCTGTGG TTTATTAATG
CAGCTACCAT TGCAATTTTT TGAAGCCATT GCCGCGGAAA ATGACTGGCA CCTGAGCCGT
AAATTCGCCG TTGGCATGTT GTTTTTAAGC CAAGATGAAG AACTGGCCGA CCAAGCCAAG
TTTATTCTCG AACGCGAACT AGAGCGTGAA ACCTTAAGCA TTGCCGGCTG GCGTAAAGTC
CCCGTCAATC CTGAGGTATT GGGTGAGATA GGTAAATCGA GCCTGCCGCA AATCTATCAA
GTACTGATCA ACGCCCCGAT TGGCTGGCGT GAGAAAGACC TTGAGCGTCG CCTCTACATG
GCTCGCCGCC GTTTAGAGCA ACAAATTACT GACGATAAAG ACTTTTATGT CGCGAGTCTT
TCAGGCCAAG TCATAGTCTA CAAAGGCTTG ATGATGCCTG CCGACTTGCC CGCATTCTAT
CCAGACCTTG CCGACATCCG TTTGAAGAGC TCTATTTGTT TATTCCATCA ACGCTTTTCA
ACCAATACTT CACCTAAATG GCCACTCGCT CAGCCCTTTA GATATCTTGC CCATAACGGC
GAGATCAACA CTATTACCGG TAACCGCCAA TGGGCCCGTG CCCGTGCCTA CAAGTTTAAT
TCACCGCTGC TGCCCGACTT ACAACAGGCG GCACCCTTTG TGAATGAAAC AGGCTCCGAT
TCATCCTCCC TCGATAATAT GCTCGAGATG CTGCTATCAG GTGGCATGGA CTTATACCGC
GCCATGCGTT TGCTTATTCC GCCAGCGTGG CAGAGTAATC CAGAGATGGA TGACGAGCTA
AAAGCCTTCT ATGACTTTAA CTCCATGCAT ATGGAACCTT GGGATGGTCC TGCGGGTATC
GTAATGACCA ACGGTCGCCA CGCCGCTTGC GCAGTGGATC GTAACGGCCT GCGTCCATCA
CGTTATGTGA TCACTAAAGA TCGTATCCTC ACCCTCGCCT CCGAAGTGGG CATTTGGGAC
TACGCCGCCG ATGAAGTGAT TGAAAAAGGC CGTGTCGGCC CAGGTGAGCT GTTAGTGTTA
GATACACTCA ATGGTCGTCT GTACCAGTCA TTCGAAATCG ATAACGATCT TAAGCGTCGT
CACCCCTATA AAGAGTGGAT GGCGAAAAAC AGCCGTACTC TGGTACCAGC CGAGCAGTTG
GCAACGGAGC AACATGGCGC CAGCGAATTA AGCCCTGAGC AACTACTGCA ATACCAAAAG
CAATTTGGTT ACACCCGCGA AGAGCTTGAA CAAGTGATTT GGGTGCTGGC AAAACAAGGC
GAAGAAGCGA CAGGTTCCAT GGGCGACGAT ACGCCAATGG CCGTATTGTC GAAAAAGTCA
CGCTCACTCT ATGACTATTT CCGACAGAAA TTCGCTCAAG TCACTAACCC GCCTATCGAT
CCGCTGCGTG AAAAGCACGT GATGTCTCTG GCGACCTGTA TCGGCCGCGA GCAAAACCTC
TTCAACGAAA CCACTGGCCA TGCCTATCGA GTGATGTTCA ACTCGCCGAT ATTATTATTC
AGTGATTTCA ATCAATTACT CGGATTAGAT AGCACTTACT ATCGCGCCAA TATCGTCGAT
TTAAACTACG ATCCGAAGGA AGGCTTAGAG CACGCTATCC GCCGCATCAC TTCGGAAGCC
GAGCGTTTAG CCCGCAGTGG CACTACACTG CTGATTTTAT CCGACCGCGC GATTGATAAA
TCGGCGCAGG TGATCCCAGC GGCCATGGCA GTTGGCGCAG TACAACAAAT GCTGGTGAGT
AAGAGCCTGC GCTGCGATAC CAACATCATT GTCGAGACCG CATCGGCGCG GGATCCGCAC
CACTTTGCAG TGCTACTCGG CTTTGGTGCT ACGGCGATTT ATCCTTATCT AGTGTATGAA
TCAATCTCAG ATCTAGCGAA ACGCCATCAA TTGACCGATA CCACGGCGTT GATGCTGAAC
TTCCGCTACG GCATCGAGAA AGGCCTGCGT AAGATCATGT CGAAGATGGG GATCAGCACC
GTCGGCTCCT ACCGTTGTAG CCAACAGTTT GAGGCCATTG GTATTGCCAG CGATGTGATT
GAACTCTGCT TTAAAGGAGT GGTGAGCCGC ATCGAAGGCG CCAGCTTTGA GGATATCGCT
CAAGATCAAG CGCTGCTGCA TAAGGCCGCT TACCGCGCCC ATGTGCCGCT GCCACAAGGC
GGTTTACTCA AATACGTTGA TGGCGGTGAG TACCACTGCT TCAACCCAGA TGTGGTCAAC
ACGCTGCAAG CATCCTTAAT CGACAAGAAT TTTGCGACCT ACAAGAAGTT CGCCGAATTA
GTCGATAATC GCCCGGTTGC CACCCTAAGG GATTTAATTG GCATTAAAGC TGACCAAGCC
GCAATTGAAC TGGATAAGGT CGAAGCTGCC AGCCATTTAT TCCCGCGCTT TGACAGTGCG
GCCATGAGTA TCGGCGCCCT AAGCCCCGAG GCCCATGAGG CATTAGCCAT CGCCATGAAC
CGTTTAGGTG GCCGCTCTAA CTCCGGCGAA GGTGGTGAGG ATGCACGCCG CTTTAATACC
GAGCGTAACT CGGCAATTAA GCAAATTGCC TCGGCACGTT TTGGCGTAAC CGCCCATTAC
CTAGTCAACG CCGATGTGCT GCAGATTAAA GTCGCACAGG GCGCAAAACC CGGTGAAGGC
GGACAACTGC CAGGCCATAA GGTGAGTGTG GAAATTGCAG GGCTGCGCCA CGCACGCCCA
GGTGTAACCT TGATTTCACC ACCACCGCAC CATGATATTT ACTCTATCGA AGACTTAGCC
CAGCTGATTT TCGACTTAAA ACAAATCAAT ACCAAGGCAC TGATCTCAGT GAAGTTAGTG
TCTGAGCCAG GTGTCGGCAC GATCGCCACC GGTGTGGCAA AAGCCTACGC CGATATGATC
ACTATTTCTG GCTACGATGG CGGCACGGGC GCGAGCCCTA TCACCTCGGT GAAATACGCC
GGCAGCCCAT GGGAACTCGG CCTTGCCGAA GTGCATCAAT CTCTGGTGGA AAATGGTCTG
CGCCATAAGA TCCGCTTGCA GGTCGATGGC GGCCTAAAAA CCGGTACCGA CGTTATCAAG
GCGGCCTTAC TCGGCGCCGA GAGCTTCGGA TTCGGGACTG TGCCCATGAT TGCTTTAGGT
TGTAAGTACC TGCGTATTTG CCACCTGAAC AACTGCGCAA CCGGTGTCGC GACTCAGGAC
AAGAAACTGC GCGATAACCA CTACCACGGC TTACCAGAGC GAGTGATGAC TTACTTTGAG
TTTGTCGCCG AGGAAGTGCG CGAATGGATG GCAACGCTAG GGGTCAGCAA GTTCGAAGAC
TTAGTCGGCC GCAGTGAGTG GCTACATACC TTGGAAGGCC AGACCGATAA GCAACGTGGA
CTCGATTTAG CGCCGATCCT GTATCAGCCA AAGGTCAGAG CCAGCACCTC GCGCACTTGG
CAGGAAACCA ATCCACCAGC GGATTTAGGC TTACTCAACC AACATCTGCT CAACGAGTGC
CAGAATGCGG TCGATAAGGG CGAGTGTTTC GATGCCGCAT ACAGTATCAA CAATACTGAC
CGCTCAGTGG GCGCACGCCT ATCGGGCTAT ATCGCCAGCA CCCTTGGCGT TAAAGGCACT
AAGGCCCCGA TTAAACTCAG CTTTAATGGC AGTGCCGGCC AAAGCTTTGG GGTATGGAAC
AGCCCAGGTC TTGAACTCAA GCTCTGCGGT GATGCCAACG ACTATGTCGG TAAAGGCATG
TCGGGCGGCA AGATTGTGAT TTATCCACCG CTAGGCAGTC CATTCCAGAG CGAGCGCAGC
GCGATTGTCG GTAACACTTG TCTGTATGGC GCAACTGGCG GACGCTTCTT CGCCGCGGGT
CAAGCGGGTG AACGCTTCGC GGTACGTAAC TCGGGTGCCA TTGCCGTAGT TGAAGGCTTA
GGCGATAACG GCTGCGAATA CATGACCAGC GGTATCGTAG TCGTACTCGG TAAAACTGGG
GTCAACTTCG GCGCAGGGAT GACGGGCGGT TTTGCCTATG TCTTCGACCA ATTTGGCCGC
TTTAACCGCC GTGTGAATAA CGAGCTTGTC GATACCCAAA AACTCGAGTC ACCTATCCAT
CAACAGCATT TGAAAGGCTT GATTGAAGAA CATGTGGCCG AGACCGGCAG TGAGCACGCG
AAGATGATCT TAAGCGACTT TGCCAACTGG TTAGATTGCT TTGTTTTAGT GAAACCGAAA
AATATCGCCG TTGCAGATCT GCTCAAATTA GAGCAATCGA GCCCGGAACT AGCAGTTAAA
GCGGGGTAA
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| Protein sequence | MSLYHPSFER DNCGFGLIAQ MDGEASHRIV RTAIHGLDRM KHRGGIASDG RTGDGCGLLM
QLPLQFFEAI AAENDWHLSR KFAVGMLFLS QDEELADQAK FILERELERE TLSIAGWRKV
PVNPEVLGEI GKSSLPQIYQ VLINAPIGWR EKDLERRLYM ARRRLEQQIT DDKDFYVASL
SGQVIVYKGL MMPADLPAFY PDLADIRLKS SICLFHQRFS TNTSPKWPLA QPFRYLAHNG
EINTITGNRQ WARARAYKFN SPLLPDLQQA APFVNETGSD SSSLDNMLEM LLSGGMDLYR
AMRLLIPPAW QSNPEMDDEL KAFYDFNSMH MEPWDGPAGI VMTNGRHAAC AVDRNGLRPS
RYVITKDRIL TLASEVGIWD YAADEVIEKG RVGPGELLVL DTLNGRLYQS FEIDNDLKRR
HPYKEWMAKN SRTLVPAEQL ATEQHGASEL SPEQLLQYQK QFGYTREELE QVIWVLAKQG
EEATGSMGDD TPMAVLSKKS RSLYDYFRQK FAQVTNPPID PLREKHVMSL ATCIGREQNL
FNETTGHAYR VMFNSPILLF SDFNQLLGLD STYYRANIVD LNYDPKEGLE HAIRRITSEA
ERLARSGTTL LILSDRAIDK SAQVIPAAMA VGAVQQMLVS KSLRCDTNII VETASARDPH
HFAVLLGFGA TAIYPYLVYE SISDLAKRHQ LTDTTALMLN FRYGIEKGLR KIMSKMGIST
VGSYRCSQQF EAIGIASDVI ELCFKGVVSR IEGASFEDIA QDQALLHKAA YRAHVPLPQG
GLLKYVDGGE YHCFNPDVVN TLQASLIDKN FATYKKFAEL VDNRPVATLR DLIGIKADQA
AIELDKVEAA SHLFPRFDSA AMSIGALSPE AHEALAIAMN RLGGRSNSGE GGEDARRFNT
ERNSAIKQIA SARFGVTAHY LVNADVLQIK VAQGAKPGEG GQLPGHKVSV EIAGLRHARP
GVTLISPPPH HDIYSIEDLA QLIFDLKQIN TKALISVKLV SEPGVGTIAT GVAKAYADMI
TISGYDGGTG ASPITSVKYA GSPWELGLAE VHQSLVENGL RHKIRLQVDG GLKTGTDVIK
AALLGAESFG FGTVPMIALG CKYLRICHLN NCATGVATQD KKLRDNHYHG LPERVMTYFE
FVAEEVREWM ATLGVSKFED LVGRSEWLHT LEGQTDKQRG LDLAPILYQP KVRASTSRTW
QETNPPADLG LLNQHLLNEC QNAVDKGECF DAAYSINNTD RSVGARLSGY IASTLGVKGT
KAPIKLSFNG SAGQSFGVWN SPGLELKLCG DANDYVGKGM SGGKIVIYPP LGSPFQSERS
AIVGNTCLYG ATGGRFFAAG QAGERFAVRN SGAIAVVEGL GDNGCEYMTS GIVVVLGKTG
VNFGAGMTGG FAYVFDQFGR FNRRVNNELV DTQKLESPIH QQHLKGLIEE HVAETGSEHA
KMILSDFANW LDCFVLVKPK NIAVADLLKL EQSSPELAVK AG
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