Gene Shewmr7_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2947 
Symbol 
ID4257389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3488684 
End bp3489208 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID638123624 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_738988 
Protein GI114048438 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000622219 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.254979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGATA GCGACGGCTT TCGCGCAAAT GTGGGCATAA TAATTTGTAA TAGATACGGC 
CAAGTCATGT GGGCCAGACG TTTTGGACAA CATTCATGGC AATTTCCTCA GGGCGGCGTC
GATGATGGTG AGACGGCCGA AGAGGCGATG TACCGTGAAT TGTATGAGGA AGTAGGCTTA
AGACCCGAGC ATGTCACTAT ATTAACCTCG ACCCGTTCTT GGTTGAGATA TCGTTTGCCT
AAACGTTTAG TGAGGCAGGA TAGTAAGCCT GTGTGTATCG GCCAAAAACA AAAATGGTTT
CTGTTACAAC TCAAAAGCCA AGATAGTGCG ATTAATTTAA GTTCTTCAGG CCACCCTGAG
TTTGACGATT GGCGTTGGGT AAGTTATTGG TATCCTGTGC GGCAAGTTGT CTCATTTAAG
CGTGATGTTT ATCGTAAGGT CATGAAAGAA TTTGCGGTAA CGGCATTGTC ATTCCAAACC
CAGGAAATTC CGAGGAAGCG GGTAAGACAA AGAACAACGG GCTGA
 
Protein sequence
MIDSDGFRAN VGIIICNRYG QVMWARRFGQ HSWQFPQGGV DDGETAEEAM YRELYEEVGL 
RPEHVTILTS TRSWLRYRLP KRLVRQDSKP VCIGQKQKWF LLQLKSQDSA INLSSSGHPE
FDDWRWVSYW YPVRQVVSFK RDVYRKVMKE FAVTALSFQT QEIPRKRVRQ RTTG