| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2946 |
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| Symbol | |
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| ID | 4257388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3486426 |
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| End bp | 3488660 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123623 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | YP_738987 |
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| Protein GI | 114048437 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00960304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.595887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAATA CGCTCAGGGA TATTACTCAA GCTGTGGCTT CCGCCCACAG CTTAGAAACC
GCATTAGAAG TCCTAGTTTC ATCGACCAAA GCGGCGATGG AAACCCAATG TTGCTCGGTC
TACATCTTAG ATCAGCAAGA ACTCGTGTTA TCTGCAACCG ATGGCCTCGA AAAGAGTGCT
GTCGGTCGAG TGCGCATGCC GTTAACCCAA GGCTTGGTTG GCTTGGCTGC TGAACGCGAA
GAAGCCGTAA ACCTTGCCGA TGCCCGTTTG CATCCACGCT TTAAACTCTT CCCCGAAGTC
GCTGAAGAAG AATACCGTGC CTTTTTAGCC GTCCCCATTA TTTATCAAAA AGCCGTAGTC
GGCGTAATTG TGGTGCAGCA GGCCAGCGCG CGGCAATTTA GCGAAGGGGA AGAAGCCTTC
TTAATGACCT TGGCCGCGCA GCTCGCGATG GCGATTAGAG GGTTAAAGCA AAAGGCGCAG
GTCAGTTCGC TGCATCAACA GATTTTATTC CAGGGCACCT CAGCATCTAG CGGTATCGCT
ATTGCCCATG CGTTAGTGCT CGGTGGCGAA ATTTCCCTCG AGCAGCCCGA TGTGCGCTGC
GAGGATATTG CCCTCGAGTC CAGCCGATTA GTGGCGGCGA TGGGGCGTTG TAAAGAGGCA
ATCGGCGCCT TATCTCAACG TTTCGACCGT GAGCAGGATG AAGAAGTAGC CTCGATATTC
AATGCCTTGC AGCTGCTGCT CGATGATGCC AGCCTAGGTG GTGAATATGC CCGTGAAGTG
CAGCAGGGAT GGGAAGCCGA ATCGGCGGTC AGCCGAGTTT CGCTGCGTTA TATTCAACAG
TTTTTAGCGA TGGAAGATCC CTACCTTAAG GAGCGGGCGA GCGATATTCG TGACCTTGGG
CAAAAGGTAT TAAGGCAGTT AATCGAACCC GAGCGCTTAG AGCTTGAGCC CGATAAGCCG
GTGATTTTAG TCACCCGAGA AGCTGATGCA ACCTTGTTAG CCGAATTCCC TCGACAAAAA
TTAGCCGGGA TTGTCACAGA ACTGGGGGGC GTCAACTCCC ATGCGGCCAT CTTAGCGCGC
GCACTTGGCG TGCCTGCCAT TACCGGCGTT GAGCAATTGT TGTCGGCCGA TATTGATCAA
AAGCTATTGG TTGTTAATGC CAGTCGTGGG CAATTAATGG TGTCGCCTTC GCCCGCCATT
GTGAGCGAAT ACCGCAGTTT GATTTCGGCG CAAAAGGCCC TGCAGCGCCA ATACGCGCAG
GAGTTAGCCC TGCCGTCGGT CATGCTCGAT GGTGCGCGCA TTCGTTTATA CCTTAACGCC
GGGTTACTCA GTGGCGTTGC CTCTGAAATT GCCGAAGGCG CCGATGGTAT CGGGCTGTAT
CGCACCGAAA TTCCCTTTAT GTTGCAGCAG CGTTTTCCCA GTGAATCTGA GCAGGTAAAA
GTCTATCAAC AGGTGTTATC GGCGGCATCG GGTCGTCCTG TGGTGATGCG TACCTTAGAT
GTTGGGGGCG ATAAGCCACT GCCTTATTTC CCGATCAAAG AAGATAACCC CTTCCTCGGC
TGGCGAGGTA TCCGCTTATC ATTGGATCAT CCCGAGCTGT TCCTCGTGCA GTTAAGAGCG
ATGTTGCAAG CGGGCGGAGA GGGCAAACAG CTCAGTATTT TACTGCCTAT GGTCAGTAAC
TTAGATGAAA TTGATCAATC CTTAGCCTAC CTAGAGCAGG CCTATGTTGA ACTCAAGAAC
GATGTGAACA GCCAGATTGA AATGCCGCGC ATTGGCATTA TGCTCGAAGT CCCTGCGCTG
TTATATCAGT TGGATGAAGT CGCAAAACGC GTCGATTTTG TGTCGGTCGG TAGTAACGAT
TTGACCCAAT ATTTACTCGC GGTGGACCGT AATAACCCGA GGGTTAGCTC ACTATTCGAT
AGTTATCATC CGGGGATCTT ACGGGCGTTG CACCAGGCAA GACTCGATTG TGATTATCAT
CAACTCGATA TTAGTATTTG CGGCGAATTG GCAGGTGAAC CCATGGGAGC GATTCTACTC
GTGGCGATGG GATACCAGCA TTTGAGTATG AACCAAGGCA GTTTAGCGCG GATTAACTAT
CTGCTGCGCC GAGTTTCCCG CGCCGATTTG ACCCAACTGT TAGCTCAGGC CTTAAGCTTG
TCGAACGGTT TCCAAGTGCG TGAGTTAGTT AAAGAATATT TAACTCAGCA AGGATTGGCC
ACAATTCTTA ATTAA
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| Protein sequence | MLNTLRDITQ AVASAHSLET ALEVLVSSTK AAMETQCCSV YILDQQELVL SATDGLEKSA
VGRVRMPLTQ GLVGLAAERE EAVNLADARL HPRFKLFPEV AEEEYRAFLA VPIIYQKAVV
GVIVVQQASA RQFSEGEEAF LMTLAAQLAM AIRGLKQKAQ VSSLHQQILF QGTSASSGIA
IAHALVLGGE ISLEQPDVRC EDIALESSRL VAAMGRCKEA IGALSQRFDR EQDEEVASIF
NALQLLLDDA SLGGEYAREV QQGWEAESAV SRVSLRYIQQ FLAMEDPYLK ERASDIRDLG
QKVLRQLIEP ERLELEPDKP VILVTREADA TLLAEFPRQK LAGIVTELGG VNSHAAILAR
ALGVPAITGV EQLLSADIDQ KLLVVNASRG QLMVSPSPAI VSEYRSLISA QKALQRQYAQ
ELALPSVMLD GARIRLYLNA GLLSGVASEI AEGADGIGLY RTEIPFMLQQ RFPSESEQVK
VYQQVLSAAS GRPVVMRTLD VGGDKPLPYF PIKEDNPFLG WRGIRLSLDH PELFLVQLRA
MLQAGGEGKQ LSILLPMVSN LDEIDQSLAY LEQAYVELKN DVNSQIEMPR IGIMLEVPAL
LYQLDEVAKR VDFVSVGSND LTQYLLAVDR NNPRVSSLFD SYHPGILRAL HQARLDCDYH
QLDISICGEL AGEPMGAILL VAMGYQHLSM NQGSLARINY LLRRVSRADL TQLLAQALSL
SNGFQVRELV KEYLTQQGLA TILN
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