| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2930 |
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| Symbol | rnc |
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| ID | 4257705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3472156 |
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| End bp | 3472836 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638123607 |
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| Product | ribonuclease III |
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| Protein accession | YP_738971 |
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| Protein GI | 114048421 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0449056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACCGA TTAAAAATTT GCCCCGTTTG TGTCGTACTT TGGGTTATGA GTTCAAGAAC
CTTGAACTTC TGACTCAAGC GTTGACCCAC AGAAGTGCGG CAAATAAGCA CAACGAGCGG
TTAGAGTTTT TAGGCGATTC GATTTTATCG ATTGTGATTT CAGACGCCTT ATACCATCAG
TTTCCTAAGG CGACTGAGGG TGATTTGAGC CGGATGCGTG CCACCTTAGT GCGTGGCGAT
ACGCTCACCT TGATTGCTAA GGCTTTTAAG CTTGGGGATT ATTTATTCTT AGGCCCCGGC
GAGTTAAAGA GTGGTGGTTT TAGACGTGAG TCCATCTTGG CCGATGCGGT CGAGGCGATT
ATCGGCGCAA TCTACTTAGA TTCCGATCTC GAAGTGTGCC GTAAGCTATT ACTGCATTGG
TACGCTGAGC GTTTGGCCGA GATCCAACCC GGCGTTAATC AAAAAGACGC TAAAACCTTA
CTGCAAGAAT ATTTACAAGG GTTAAAGAAG CCGCTACCCG ATTACCAAGT AATCAATATA
GAAGGCGATG CCCACGATCA AACATTCACC GTTGAATGTC GTATAGATGA CTTGAGCGAA
AGCGTGATTG GCGTAGCGAG TTCGCGCCGT AAAGCCGAGC AGATTGCCGC GGCTCAAGTA
TTGGAGTTAC TGAAGAAATG A
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| Protein sequence | MEPIKNLPRL CRTLGYEFKN LELLTQALTH RSAANKHNER LEFLGDSILS IVISDALYHQ
FPKATEGDLS RMRATLVRGD TLTLIAKAFK LGDYLFLGPG ELKSGGFRRE SILADAVEAI
IGAIYLDSDL EVCRKLLLHW YAERLAEIQP GVNQKDAKTL LQEYLQGLKK PLPDYQVINI
EGDAHDQTFT VECRIDDLSE SVIGVASSRR KAEQIAAAQV LELLKK
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