Gene Shewmr7_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2925 
Symbol 
ID4256794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3468488 
End bp3469009 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content44% 
IMG OID638123602 
Producthypothetical protein 
Protein accessionYP_738966 
Protein GI114048416 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG CCGTAGAGCA GCTATCAACC TATAAGAGTG TGCATTTAAA TCAGCGCAAC 
ATACTTACCC ATTTCGTTGG TATTCCATTG ATTATATGGT CTGCTTTCCT ATTGCTGGCG
ACTATCCGTA TTCCACTTGG TAGTGCGGGC GATGTGAGTT TAGGTGTAAT TTTAGGGGCA
GGTGTGCTGG TTTATTATTT TCGCTTACAT GCAAAGTTAG CGATAGGCCT GGCTTTATTT
ATCGCCCCCG TCGTATATAC CACTGAACTA ATGGCAAATT CTCCCAACGC TTTCTGGTTG
GCTATATCGG TATTTATCGT GGGATGGATT TTCCAGTTAA TTGGCCATCA ATACGAAAAG
GCCAAACCCG CTTTTGTGGA CGATTTAAAC CAACTGCTAA TTGGTCCGTT CTTCTTAATG
GCCGAAGTGT ATTTTATCTT GGGGTTCGAA AAGGGGTTAG ATGCCGAGAT TACACCTATC
GCTATCGAGA AGCGCCGGGC TCTCGATAGC AAAAAAGTGT AG
 
Protein sequence
MKSAVEQLST YKSVHLNQRN ILTHFVGIPL IIWSAFLLLA TIRIPLGSAG DVSLGVILGA 
GVLVYYFRLH AKLAIGLALF IAPVVYTTEL MANSPNAFWL AISVFIVGWI FQLIGHQYEK
AKPAFVDDLN QLLIGPFFLM AEVYFILGFE KGLDAEITPI AIEKRRALDS KKV