Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2922 |
Symbol | |
ID | 4256791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3464553 |
End bp | 3465341 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123599 |
Product | cytochrome c assembly protein |
Protein accession | YP_738963 |
Protein GI | 114048413 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.140112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCATTT TTTCTGCCTC AGCCATGTTT TTTTATTGCA TTGCATTGGT ATTAGTGACA AGTCGACTGT TCCACCCTGA AGGTCCTAAT CGTAAGGCCG TTGCCGGTGT CGCCGCCATC GCCGTGATTT TGCACGCTGC CGCCCTTTCT CAAGCGATGT TTACGACCGA TGGACAAAAC TTCAGCCTGA CCAATGTGAT CTCGTTAGTG AACTGGATCA TCGCCTTCAC CTTTACCGTG ATGATGTTTA GGCTAAAAGT GATTGTGGTG GTGCCCGTGG TTTACGCCTG CTCTGTGCTC TCTGTAGCCC TACTCTGGTT ATTGCCGCCT AAGTTTATTA CTCACTTTGA GCTGTACCCT GAGGTTTTGG CCCACGTTGT GCTCTCTCTC ATGGCATACA GCGCCCTGAT GATCGCCGCT CTGTACGCGA TTCAGCTGGC GATGATCCAA AATAAACTCA AAAAGAAACA ATTAATGTTA AGTCCAGGCA TTCCGCCGCT GATGACGGTT GAAAAGCAGC TTTATCATCT TGTGATTATT GGGGTAATTT TACTGAGTTT ATCCCTCGCC ACTGGCTTTA TCTTCCTCGA TGATATGTTT GCCGATGGCA AAGGCCATAA GGCGATTCTG TCTATCATCG CGTGGTTTGT GTATATCGCC ATGCTATGGC AGCAGTATTG GGTCGGTTGT AAAATTCGCA CCGCTGTCAT TTACACCTTA ACGGGCGCGA CCTTGTTATC CTTAGCTTAT TTCGGCGCTC GCATTGTCAA AGAGTTAATT CTTAGTTAA
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Protein sequence | MVIFSASAMF FYCIALVLVT SRLFHPEGPN RKAVAGVAAI AVILHAAALS QAMFTTDGQN FSLTNVISLV NWIIAFTFTV MMFRLKVIVV VPVVYACSVL SVALLWLLPP KFITHFELYP EVLAHVVLSL MAYSALMIAA LYAIQLAMIQ NKLKKKQLML SPGIPPLMTV EKQLYHLVII GVILLSLSLA TGFIFLDDMF ADGKGHKAIL SIIAWFVYIA MLWQQYWVGC KIRTAVIYTL TGATLLSLAY FGARIVKELI LS
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