Gene Shewmr7_2911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2911 
Symbol 
ID4256780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3452796 
End bp3454100 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content50% 
IMG OID638123588 
Productsodium/hydrogen exchanger 
Protein accessionYP_738952 
Protein GI114048402 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTT ATCAAATTCT CTGTATTCTC TGTGCGTTAG CCTTAGTCAC GTCTGTGGCA 
TCCTCGCGTT TGCATAAGTT GCAAGAAACC GTCGCCATTA CCGCATTGGC GTTGGGCATG
AGCCTGTTAC TCTTACTGGG TGGTAAAGCG CTTGGCGGCC ATGTTTATGG TTACTTTGTC
GCGGGGCTGG AGAAGCTCGA CTTTCAGGCC CTGTTACTCA ACGGCATGTT GGGTTTTCTC
TTGTTTGCTG GGGCATTACA GATCCGCTTA AAAATCTTAA GGCATCAGAA ATGGGAAATT
CTCATTCTTG CCTTTGTCAG TACCTTGCTC TCGACTTTTA TCGTCGGTGG TTTGCTTTAC
TATATTGCTC CCATGCTGGG ATTGCCCTTG GCCTTAAGCC ATTGTTTGCT CTTTGGCGCC
TTGATTTCAC CTACCGATCC AATTGCCGTG TTAGCCATTC TGAAGAAAAT GGGCGCGCCC
GAAGATATTG CCATTCAGGT AGAAGGGGAG TCGCTCTTTA ATGATGGTAT AGGGTTGGTG
ATTTTTGTGG CCATCTCCCA TCTGGCCTTT TCAACTGAGC CGCTGACCTT CTCGCAAATC
TCGCTATTGT TCATCCAAGA GGCGCTCGGG GGCGTCGTTT ATGGCGCCGT GCTCGGCGTA
TTGCTGCACC ATTTCTTTCG CTACTGTGAG GAAGAAACCC AGCTGATGTT GGTCACTTTA
CTGATCCCGA CGGCCGGTTA TGTCATCGCC GAAGTGTTAG GGGTGTCGGG CCCTCTGGCG
ATGGTCAGTG CGGGGATTAT TATCGGTAAC TACAGCGTGC CTAAGTATTT TGTGCGCCAT
GAGCGGGTAA AACTCTACAC TTTTTGGTCG CTGATTGAAT CCTTCTTCAA TGCGCTGCTG
TTCCTCTTGC TCGGATTATT ACTCCTGCTC GTCACCTTTA AGACGCCATT ATGGTGGTTT
ATGTTAGTGG CTATTCCACT CGTGTTAACG GCGCGGGCGG TGAGTGTGTT GCTGCCCTAT
ATCGGGTTTA GGTTGGTTAA GTCTTACAAT CCTTATGCCG AGTCGATACT CATTTGGGGC
GGGCTCAGGG GCGGGCTAGC CTTAGCTATG GCGATGAGTT TACCCGAGGG TGTGATTATC
GATTCTCAAA GTGGTGTCGA GCTGCGAGAG CTTGTGCTCG TGATGACATA TGCCGTAGTG
GTGTTTTCAA TCCTTGTGCA AGGCTCGAGT ATGACGGGGT TAATTCGCCG CAGTAATGCG
GTGGCAACAG AGGCTAATCA TCAGATTGCA ACTGAGCGAA CCTAG
 
Protein sequence
MTSYQILCIL CALALVTSVA SSRLHKLQET VAITALALGM SLLLLLGGKA LGGHVYGYFV 
AGLEKLDFQA LLLNGMLGFL LFAGALQIRL KILRHQKWEI LILAFVSTLL STFIVGGLLY
YIAPMLGLPL ALSHCLLFGA LISPTDPIAV LAILKKMGAP EDIAIQVEGE SLFNDGIGLV
IFVAISHLAF STEPLTFSQI SLLFIQEALG GVVYGAVLGV LLHHFFRYCE EETQLMLVTL
LIPTAGYVIA EVLGVSGPLA MVSAGIIIGN YSVPKYFVRH ERVKLYTFWS LIESFFNALL
FLLLGLLLLL VTFKTPLWWF MLVAIPLVLT ARAVSVLLPY IGFRLVKSYN PYAESILIWG
GLRGGLALAM AMSLPEGVII DSQSGVELRE LVLVMTYAVV VFSILVQGSS MTGLIRRSNA
VATEANHQIA TERT