| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2894 |
|---|
| Symbol | |
|---|
| ID | 4258472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3436256 |
|---|
| End bp | 3436903 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638123571 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_738935 |
|---|
| Protein GI | 114048385 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCCC TATTACAGCG CTTTTTACTG ACAACCACCC TATTGCTCGG CAGTTTTGTC
AGTCAGGCCG ACCCTATCGC CAAGGATGAA TATTCCGTTA GCCCACTGCT AAACGGCGAG
CAAATCCCCA CAATCACTTT GCAAGATATG AATGGGCAAA GCGTTGATTT AGCAAAATTA
ACGGCACAAA AACCAACCAT TTTCTTCTTT TACCGTGGCG GCTGGTGCCC GTTTTGCAAC
AACCAAATGG GGCAGCTAAA AGCCATCGAG CCTAAACTTA TCGACATGGG CTTTCAATTA
GTCGGTATTT CGCCGGATAC GCCCGCACAG CTAAAATCAT CGGCCGCTAA AAACGAGCTT
AAATACCAGC TGCTTTCCGA TGAAAAAATG CTGGCATCAC AAGCCTTTGG ACTCGCCTTT
TACACCAGCA AACAAGTCAC TGATACTTAT TTGAGTCGCT TAAAACTGGA TAACCCACTG
TGGACCACGC CCGAAGGCGA CAAAAGATTA GTGCTGCCAG TGCCAGCTAT CTATATCACC
GACACAAAAG GGTTAATCCA TTTCCAATAT GTAAATCCCA ACTACAAGGT GAGACCCGCG
CCTAAGTTAA TTCTGACCGC AGCAAGCCTT GTCAGTGCCC CAGAATAA
|
|---|
| Protein sequence | MQSLLQRFLL TTTLLLGSFV SQADPIAKDE YSVSPLLNGE QIPTITLQDM NGQSVDLAKL
TAQKPTIFFF YRGGWCPFCN NQMGQLKAIE PKLIDMGFQL VGISPDTPAQ LKSSAAKNEL
KYQLLSDEKM LASQAFGLAF YTSKQVTDTY LSRLKLDNPL WTTPEGDKRL VLPVPAIYIT
DTKGLIHFQY VNPNYKVRPA PKLILTAASL VSAPE
|
|---|
| |