Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2889 |
Symbol | |
ID | 4255723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3428190 |
End bp | 3428981 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123566 |
Product | ROK family protein |
Protein accession | YP_738930 |
Protein GI | 114048380 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.354605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAT TAACAATAGA CGTGGGCGGT AGCAAAGCCC TGTTCGAACT TCAACTCAAG GGGCATACAG AACAATATAA AATCCCCACG GGTGAAGGCT TTAAAATTGA AGATTTAAAT GATCAAATCG CGGCGCTTGA ACGGGATTAT GATTTACAGA ATTACCATTT AGCGATTGCT GTACCTGGAC TCGTACAACA GAATCGTTTG GTGTCCTGTA AGTCTTTGCC CGGTCTCAAT GGGCTAAGCT TTGAAACCTT GAAAACTCAA GGCGAACTTA AGTTTATCTG CAATGATATC GACGCCGGTA TGCAGGCAAC CTGTGACGAA AAATATGCCT GTGAGTTGTT AGTCATGTGT GGCACTGGGA TTGGCATGTC GATCGCGTTT AATGGTAATG CTTTTACTGG CGCGACTGGG GTTGCGGGGG AACTTGGGCA TTGCCGGGTG ATGACAGAAT CGGGGGAATT TAGTCTCGAA CAACTCGCCA GTGGCGATTC TATCCGCAGC CGCAAGATTT CTACCGCCGA TGATTTATAT CTCGCCGGCA CTTATCTGGG TATGGGGCTG GCATGGGCGG TCAATCTGTT TAATCCAAAT CGGATTTGGT TAGCGGGCGG CATGATGAAC AGCGCGCCTT ACTACAAGGG TTGTCTGGAT AGTTTAAGAC GCATGGCCCT AAGTGCACCG TTAGCCGAAA TGAAGATTAA TCGTGTCGAT GATATGGAAA CCTTGGTTTG CCGAGGTTTG TCGGTGATCT TGGCAAGGGA TTACTCGAAG AGCGCTGCTT AG
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Protein sequence | MQTLTIDVGG SKALFELQLK GHTEQYKIPT GEGFKIEDLN DQIAALERDY DLQNYHLAIA VPGLVQQNRL VSCKSLPGLN GLSFETLKTQ GELKFICNDI DAGMQATCDE KYACELLVMC GTGIGMSIAF NGNAFTGATG VAGELGHCRV MTESGEFSLE QLASGDSIRS RKISTADDLY LAGTYLGMGL AWAVNLFNPN RIWLAGGMMN SAPYYKGCLD SLRRMALSAP LAEMKINRVD DMETLVCRGL SVILARDYSK SAA
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