| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2886 |
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| Symbol | |
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| ID | 4255720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3422854 |
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| End bp | 3424182 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123563 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_738927 |
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| Protein GI | 114048377 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACCA AAGCGGCAAA ACCTCTGGTC AAGCTCGTCG ACCGTTATTT ACCCGACCCT
TATATCTTTG TCTTGCTCTT AACCTTAGTG GTACTGATCT CGGCGGTGGT GGCCGAGCAG
AAAACCCCAC TCGAAGTCAT CAATTATTGG GGCGATGGCT TTTGGGCGCT ACTGAGTTTT
TCGATGCAGA TGCTATTAGT GCTGGTGGCG GGATTTATGC TCGCCAGCTC GCCACCGATT
AAGAAATTAC TCGATGGCAT CGCAGGATTT GCCAAGTCGG CGCCGCAGGC GATTATCTTA
GTAACCTTGG TTTCCCTCGC CGCCAGTTGG ATTAACTGGG GTTTTGGCTT AGTGGTTGGC
GCCTTATTCG CTAAGGCCTT AGCGCGTAAA GTGCGTGTGG ATTACCGTTT ATTGGTCGCC
AGTGCTTACT CGGGATTTGT GGTTTGGCAT GGCGGCTTAG CGGGCTCGAT TCCGTTAACT
ATTGCCACTG CGGGGCATTT CTCAGAATCA CAAATCGGTA TTATCCCCAC CAGCGAGACC
ATCTTCGCTA GCTTTAACCT GCTGTTAGTG CTGATTTTAT TTGTGGTGAT GCCACTGGTG
AACCGCTTTA TGTTGCCCGA AGAGAAAGAC AGCATTTATG TCGATCCTAA GGCGCTTGAG
GATGGGGGCG CAGACGATAA AGCGGCACAG TTAACGGCCA ATACGACTCG TCCTGCGGAT
AAATTAGAAA ACAGTCGCTT GCTCGGTTGG AGTGTCGGCG GCGCGGGACT CGTTTACTTG
GGCTATTACT TTGAGGTGCA GGGCGGCAGC TTAAACCTTA ATCTAGTCAA CTTCTTATTT
TTATTCCTCG CCATTGTGCT GCATCAAACG CCACGCAGTT TACTGCTAAG CCTCAACGAA
GCCATTAAAG GCGGCGCGGG TATCGTTATT CAGTTTCCCT TTTACGCTGG CATTATGGCG
GTGATGGTGC AATCGGGGTT AGCCCAGAGT ATTTCCGAAG GTTTTGTGGC CATCGCTAGC
GCCGAAAGCC TGCCATTTTG GAGCTTTATC AGTGCAGGGA TTGTGAATAT TTTCGTGCCT
TCGGGGGGCG GACAATGGGC TGTGCAGGCG CCGATTATGT TGCCTGCGGC CGAAGCCTTG
GGCGCCGATG TGGCACGTGT TGCCATGGCA GTGGCTTGGG GTGATGCGTG GACCAATCTT
ATTCAGCCTT TCTGGGCGCT GCCAGTGCTA GCGATCGCCG GATTAAAAGC GCGGGATATC
ATGGGGTTCT GTTTAATGCA GTTGCTGATA ACCGGGGTGA TTATCAGTAT CGCCCTAAGC
TGGTTTTAA
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| Protein sequence | MLTKAAKPLV KLVDRYLPDP YIFVLLLTLV VLISAVVAEQ KTPLEVINYW GDGFWALLSF
SMQMLLVLVA GFMLASSPPI KKLLDGIAGF AKSAPQAIIL VTLVSLAASW INWGFGLVVG
ALFAKALARK VRVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSES QIGIIPTSET
IFASFNLLLV LILFVVMPLV NRFMLPEEKD SIYVDPKALE DGGADDKAAQ LTANTTRPAD
KLENSRLLGW SVGGAGLVYL GYYFEVQGGS LNLNLVNFLF LFLAIVLHQT PRSLLLSLNE
AIKGGAGIVI QFPFYAGIMA VMVQSGLAQS ISEGFVAIAS AESLPFWSFI SAGIVNIFVP
SGGGQWAVQA PIMLPAAEAL GADVARVAMA VAWGDAWTNL IQPFWALPVL AIAGLKARDI
MGFCLMQLLI TGVIISIALS WF
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