Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2879 |
Symbol | |
ID | 4255713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3417277 |
End bp | 3418191 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123556 |
Product | hypothetical protein |
Protein accession | YP_738920 |
Protein GI | 114048370 |
COG category | [S] Function unknown |
COG ID | [COG2035] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATATT TGCTGACCTA TTTTAAGGGA ATGGCCATGG GGGCCGCCGA TGTGGTGCCT GGGGTTTCGG GTGGCACTAT CGCCTTTATC ACCGGAATTC TCGATACCCT ACTCGAAAGC GTTAAACGTA TTAATCCTTC GCTTTGGGGC GTGATTAAGT CGCAGGGGAT TAAAGGCGCC TTTGAGCATA TCAATGGCGG ATTTTTACTG AGCCTATTAG CGGGCATCCT GACCAGTATT TTTACCTTCG CTAAACTGAT TTCTTGGTTG CTGGTGGCGC ATCCCATTCC GATTTGGTCA TTCTTCTTTG GCCTCATCAT CATCTCAGTG GTGCACATGC TTAAACAGGT GAGCGGTTTT ACGCTGGCGC GTTTGGGATT ATTCGCCTTA GGGGTTCTGG CTGCTTGGGT GATCACTGTG CTAAACCCTG TATCGGTCGA GGCCAGCTAT TTAAATATTT TCTTCGGCGG TGCGATTGCC ATTTGTGCCA TGGTATTACC GGGGATTTCG GGTAGTTTTA TCTTATTACT GCTCGGCTTA TATCCTGTGG TACTCGCGGC GGCAAAAAAT ATCCAAATCG ATATCTTGGC CTGTTTTGCC GTTGGCGCTT TGCTGGGGAT TTTAAGCTTT AGCCATTTAC TCTCGGCCTT GCTGCGTAAA TACCATGATG CGACCGTAGT GTTTCTCACG GGTCTGATGC TCGGCACCTT AGGTAAAATT TGGCCTTGGA AACAAACCTT AACCTGGCGT ACTAACTCCC ACGGTGAACA AGTGCCGCTA TTGGAGCAAA ATATTTCGCC GCTGAATTTT GAACAAGTGA CGGGACAACC TTCACAGCTG ATGTTAGCTG TTGTGTGTAT GTTGGCGGCC ATTGCCTTAG TCTGGGGTTT AGAGAAGGTC GGCAAACGGG ATTGA
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Protein sequence | MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDTLLES VKRINPSLWG VIKSQGIKGA FEHINGGFLL SLLAGILTSI FTFAKLISWL LVAHPIPIWS FFFGLIIISV VHMLKQVSGF TLARLGLFAL GVLAAWVITV LNPVSVEASY LNIFFGGAIA ICAMVLPGIS GSFILLLLGL YPVVLAAAKN IQIDILACFA VGALLGILSF SHLLSALLRK YHDATVVFLT GLMLGTLGKI WPWKQTLTWR TNSHGEQVPL LEQNISPLNF EQVTGQPSQL MLAVVCMLAA IALVWGLEKV GKRD
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