Gene Shewmr7_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2879 
Symbol 
ID4255713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3417277 
End bp3418191 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID638123556 
Producthypothetical protein 
Protein accessionYP_738920 
Protein GI114048370 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATATT TGCTGACCTA TTTTAAGGGA ATGGCCATGG GGGCCGCCGA TGTGGTGCCT 
GGGGTTTCGG GTGGCACTAT CGCCTTTATC ACCGGAATTC TCGATACCCT ACTCGAAAGC
GTTAAACGTA TTAATCCTTC GCTTTGGGGC GTGATTAAGT CGCAGGGGAT TAAAGGCGCC
TTTGAGCATA TCAATGGCGG ATTTTTACTG AGCCTATTAG CGGGCATCCT GACCAGTATT
TTTACCTTCG CTAAACTGAT TTCTTGGTTG CTGGTGGCGC ATCCCATTCC GATTTGGTCA
TTCTTCTTTG GCCTCATCAT CATCTCAGTG GTGCACATGC TTAAACAGGT GAGCGGTTTT
ACGCTGGCGC GTTTGGGATT ATTCGCCTTA GGGGTTCTGG CTGCTTGGGT GATCACTGTG
CTAAACCCTG TATCGGTCGA GGCCAGCTAT TTAAATATTT TCTTCGGCGG TGCGATTGCC
ATTTGTGCCA TGGTATTACC GGGGATTTCG GGTAGTTTTA TCTTATTACT GCTCGGCTTA
TATCCTGTGG TACTCGCGGC GGCAAAAAAT ATCCAAATCG ATATCTTGGC CTGTTTTGCC
GTTGGCGCTT TGCTGGGGAT TTTAAGCTTT AGCCATTTAC TCTCGGCCTT GCTGCGTAAA
TACCATGATG CGACCGTAGT GTTTCTCACG GGTCTGATGC TCGGCACCTT AGGTAAAATT
TGGCCTTGGA AACAAACCTT AACCTGGCGT ACTAACTCCC ACGGTGAACA AGTGCCGCTA
TTGGAGCAAA ATATTTCGCC GCTGAATTTT GAACAAGTGA CGGGACAACC TTCACAGCTG
ATGTTAGCTG TTGTGTGTAT GTTGGCGGCC ATTGCCTTAG TCTGGGGTTT AGAGAAGGTC
GGCAAACGGG ATTGA
 
Protein sequence
MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDTLLES VKRINPSLWG VIKSQGIKGA 
FEHINGGFLL SLLAGILTSI FTFAKLISWL LVAHPIPIWS FFFGLIIISV VHMLKQVSGF
TLARLGLFAL GVLAAWVITV LNPVSVEASY LNIFFGGAIA ICAMVLPGIS GSFILLLLGL
YPVVLAAAKN IQIDILACFA VGALLGILSF SHLLSALLRK YHDATVVFLT GLMLGTLGKI
WPWKQTLTWR TNSHGEQVPL LEQNISPLNF EQVTGQPSQL MLAVVCMLAA IALVWGLEKV
GKRD