| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2876 |
|---|
| Symbol | |
|---|
| ID | 4255710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3413403 |
|---|
| End bp | 3414677 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638123553 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738917 |
|---|
| Protein GI | 114048367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3681] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTC AATGGCAGCA ATACATTCAG ATTATTAACC AAGTGGTTAA ACCCGCCCTA
GGCTGTACCG AGCCGATTGC CGCCGCCTAT GCTGCGGCCG TGGCCCGTAC ATTATTGCCC
GTAGAGCCAG AGTCAATTGC AGTACAAGTT TCAGATAATC TGTATAAAAA CTCGATGGGC
GTCTATGTCC CCGGCACAGG CAAAATCGGC CTTGCTATCG CTGCGGCTGC GGGCGCGCTT
GCGGGCGATG CCGAAGCGGG ACTCGAAGTC CTTGCCAACG TTACTCCGGA GCAAGTCACC
AAGGCGCAAA CCCTAATCGA TGCGGGAAAA GTGAAGGTAG AGCGAACCGA GACTGACGAA
TTTATTTATT GCTGCGTGAG CTTAACCGCT GGCGAGCAAG AGGCGATGGT GAAAATCTGT
GGCGGCCATA CCTTAATTGC CGAGAAGCGT TTAAACGGTG AACTGGTGTT TACCGCAGAT
AACGCCCAAG CCAAGGCCAC AGGCTCAATC TGCGATGGTA TAGATATCAA TATTGAGTCG
ATTTACCGCT TCGCCCAGGA AGTGCCCTTC GAAGAAATCC AATTTATCCT TAAAGCCTCT
GAATTAAACA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGTTT GGAAGTTGGC
CGTACCATGA AAAACGGCAT TGCCGCTGGG ATCATCGGTG AGGACTTACT CAATAAGATT
GTGATGCTCA CCGCGGCGGC TTCGGATGCG CGTATGGGCG GCGCTAATCT GCCCGCCATG
AGCAATTTAG GCAGTGGTAA CCAAGGGATT GCGGCGACGA TTCCTGTGGT GATCACCGCC
CAATGTTATA AGGTCAGCGA AGAGAAACTG GCTCGCGCGC TGATCATGAG CCACCTCGGG
GCGATTTATA TCAAATCCCA CTACCCGCCG TTATCGGCAT TCTGTGGCAA TACGGTCACC
AGTGCCGCAG CCTCTATGGC CATGGTGTAT TTAGCGGGCG GCAGCTTCGA GCAATCCTGC
TATGCGATTC AAAACGTCAT CAGTGACAGC TCGGGCATGG TCTGTGACGG TGCCAAAGCC
TCCTGCGCTA TGAAAGTCAG TACCTCTTCG AGTGCGGCGG TACGTTCATT CTTAATGGCG
CTAAGTAGCC AAAACGTGTC AGGCCAAGGC ATCATAGCCA AAGATGTAGA GAAAACCATT
AAGAACATAG GCAAAATGGT ACTTAACGGC ATGTCATCTA CGGATGTCAC CATCATTAAT
ATCATGTCAG AATAA
|
|---|
| Protein sequence | MKPQWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLP VEPESIAVQV SDNLYKNSMG
VYVPGTGKIG LAIAAAAGAL AGDAEAGLEV LANVTPEQVT KAQTLIDAGK VKVERTETDE
FIYCCVSLTA GEQEAMVKIC GGHTLIAEKR LNGELVFTAD NAQAKATGSI CDGIDINIES
IYRFAQEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC YAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LSSQNVSGQG IIAKDVEKTI KNIGKMVLNG MSSTDVTIIN
IMSE
|
|---|
| |