Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2867 |
Symbol | |
ID | 4257539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3400574 |
End bp | 3403039 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123544 |
Product | EcoEI R domain-containing protein |
Protein accession | YP_738908 |
Protein GI | 114048358 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATA GTGGAAGCCT ACTAATGCAA AAAGCCTTGT TAACTGAAGC CGATATCGTC TCCAAGTTCA TTTTACCAGC CATCAAGCAA GCAGGATGGA ACGATATGAC ACAAATCCGT CAAGAGGTAA AACTTCGAGA TGGTAAAGTG ATTGTTCGTG GTCAGGTTGC AGCAAGGCGA AAAGTAAAAT CAGCCGACAT AGTGCTCTAT CACAAGCCAT CCATGCCACT GGCTGTCATA GAGGCCAAGG CCAACAAGCA TGAAATTGGC AAGGGAATGC AACAAGGGCT GGATTATGCC GCCTTACTGG AAGTGCCATT TATATTTGCG TCAAACGGAG ATGGTTTCGT TTTTCACGAT AAAACCAATC CTCTAGCACT CGAAACCACT ATCACCCTCG AAGATTTCCC CACACCGGCG CAGCTGTGGG ACAAGTACTG CACTTGGAAG GGATACAAGA CAGAGCATTT GCCGGTTATC ACACAGGATT ATTATCCTGA CAGCAACGGT AAGGCGCCGC GCTATTATCA GCTTCAAGCC ATCAATAAAA CCGTTGAGGC TGTTGCAGCA GGGCAGGACA GAGTGCTTTT AGTTATGGCA ACTGGCACAG GGAAAACATA CACAGCCTTT CAAATCATCT GGCGCTTGTG GAAGTCCCGC GCTAAAAAAC GCATCCTGTT TCTTGCTGAC CGCAACATCC TAGTCGATCA AACTAAAACC AATGATTTTC AACCCTTTGG TACGTCCATG ACCAAGGTTA CTGGCAGAAC TGTAGACCCA GCCTACGAAA TACATCTCGC GCTTTATCAG GCGCTAACAG GCCCAGAAGA AAGCCAAAAA GCGTATAAAC AAGTTGCGCC AGATTTCTTC GATCTTATTG TTGTTGATGA GTGTCACCGC GGCAGTGCCG CCGAAGACAG TGCCTGGCGT GAAATACTCG AATATTTCTC CGCTGCGACT CAAATTGGCC TTACTGCTAC CCCCAAAGAA ACCGATGAAG TCTCCAACAC CGAATACTTT GGTGATCCTG TGTATACCTA TTCACTCAAG CAGGGCATTG AGGACGGGTT CCTTGCGCCA TACAAGGTGA TCCGCGTCGA TATTGATGTG GACGTTCAGG GATGGCGCCC AAACAAAGGC CAATTGGATA AAGCTGGGCA CGAAATCGAA GACCGCATCT ACAACCAAAA GGATATGGAC CGCACTCTGG TCATTGATGA GCGAACTGAA CTGGTCGCTA AAACCATCAC CCAATATTTG CAGCGCACCG ACCCCATGGC CAAAACCATA GTGTTCTGTA ATGACATCGA TCATGCGGAA CGCATGCGCC GCGCCTTGGT AAACCTCAAT CCTAAGCAAG TGGCCAAAAA CGATAAATAC ATCATGAAGA TCACCGGTGA TGATGAAATC GGCAAAGGCC AATTGGATAA CTTCATCAAT CCCAAAAAAG CCTATCCGGT CATTGCCACT ACCTCAGAGC TGATGACCAC CGGCGTCGAT GCCAAAACCT GTAAGCTGGT GGTGCTCGAC CAATCCATCC AGTCAATGAC CAAGTTCAAG CAAATCATCG GCCGTGGCAC CCGCATTGAC GACAGATACA ACAAATTGTG GTTCACCATT CTCGATTTCA AAAAGGCTAC TGAACTCTTT GCCGACGAGC GCTTCGATGG TACCCCCGAG CGGGTTAAGC AGGTCAAGCC AGAGGACTTC GACACCGAAG AAGGTTTAAA CAACATCTCT GAAGACGATA TTGATGCAAC CAGTGGCGAT CCGACCTCAA TCTTTGATGG TGAGGATATC GATCCTGGCT CGATTCAGGA GCCGCCATCC AGCTATCAGA TGGGGGCAGG CAATAACAAG CAGGGCAATG ATAGTGATTG GGAAAGCGAA GATAAAGTCC GCAAATTCCA TGTTAACGGC GTGGCCGTAA AAGCGCTGGC GGAGCGGGTA CAGTATTACG ACACTGACGG CAAACTGGTT ACCGAGTCAT TTAAAGATTA CACCCGTAAA ACCCTGTCTA AACAGTTTGC CTCTATGGAC GAGTTTATCA AGCGCTGGCA TGGCGCCGAG CGTAAGCAGG CCGTCATAGA AGAACTGGCA ACTCTGGGGA TCGTCTGGGA GCTCTTGGAG CAAGAGGTCG GCAAAGAAAT GGACCCCTTC GACCTTATTT GCCATGTGGT GTATGACCAA CCGCCACTCA CCCGCCGCGA GCGTGCCGAG CAGGTGAAAA AGCGCAACTA TTTCACCAAA TACTCAGATA CCGCCCAGCA AGTGCTCCAA AGCCTACTTG ATAAGTATGC CGACGCCGGA GTACAGGAGA TTGAAAACCG TCAGGTATTG AAGGTCGCCC CCTTTACTGA GTTGGGACGC CCTATGGAAA TTGTGAAAAA GAGCTTTGGG GATGTCGCTG ATTACGAGCA GGCTATCAGC GAACTTGAGG CCGCTATCTA TCAATCGGTG GGGTAA
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Protein sequence | MDDSGSLLMQ KALLTEADIV SKFILPAIKQ AGWNDMTQIR QEVKLRDGKV IVRGQVAARR KVKSADIVLY HKPSMPLAVI EAKANKHEIG KGMQQGLDYA ALLEVPFIFA SNGDGFVFHD KTNPLALETT ITLEDFPTPA QLWDKYCTWK GYKTEHLPVI TQDYYPDSNG KAPRYYQLQA INKTVEAVAA GQDRVLLVMA TGTGKTYTAF QIIWRLWKSR AKKRILFLAD RNILVDQTKT NDFQPFGTSM TKVTGRTVDP AYEIHLALYQ ALTGPEESQK AYKQVAPDFF DLIVVDECHR GSAAEDSAWR EILEYFSAAT QIGLTATPKE TDEVSNTEYF GDPVYTYSLK QGIEDGFLAP YKVIRVDIDV DVQGWRPNKG QLDKAGHEIE DRIYNQKDMD RTLVIDERTE LVAKTITQYL QRTDPMAKTI VFCNDIDHAE RMRRALVNLN PKQVAKNDKY IMKITGDDEI GKGQLDNFIN PKKAYPVIAT TSELMTTGVD AKTCKLVVLD QSIQSMTKFK QIIGRGTRID DRYNKLWFTI LDFKKATELF ADERFDGTPE RVKQVKPEDF DTEEGLNNIS EDDIDATSGD PTSIFDGEDI DPGSIQEPPS SYQMGAGNNK QGNDSDWESE DKVRKFHVNG VAVKALAERV QYYDTDGKLV TESFKDYTRK TLSKQFASMD EFIKRWHGAE RKQAVIEELA TLGIVWELLE QEVGKEMDPF DLICHVVYDQ PPLTRRERAE QVKKRNYFTK YSDTAQQVLQ SLLDKYADAG VQEIENRQVL KVAPFTELGR PMEIVKKSFG DVADYEQAIS ELEAAIYQSV G
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