| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2857 |
|---|
| Symbol | |
|---|
| ID | 4257529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3391018 |
|---|
| End bp | 3391281 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638123534 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_738898 |
|---|
| Protein GI | 114048348 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.280975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG TTAAAAGAAT CGTTCGTAAA CACGAAGCCA AAACAATGCT TGGAATTAGC
CACAGCACCT TGCATGAACG TATCAATGCT GGGTTGATAC CACCTCCCTT TCGGTTATCG
GGTCGTGCTG TAGGTTGGTA CGAGTATGAA ATCCAATATA TTCTCGCGGC CCTTGCCGCT
GAAGAATCGG ATACTGAAAT CGCATTGGTA GTAAATAGCC TGCTGAAACA ACGTAAAGAA
GCCTGGGCAG CATTAAGGCG CTAA
|
|---|
| Protein sequence | MSEVKRIVRK HEAKTMLGIS HSTLHERINA GLIPPPFRLS GRAVGWYEYE IQYILAALAA
EESDTEIALV VNSLLKQRKE AWAALRR
|
|---|
| |