| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2845 |
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| Symbol | |
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| ID | 4255995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3375976 |
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| End bp | 3377625 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123522 |
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| Product | malate synthase |
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| Protein accession | YP_738886 |
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| Protein GI | 114048336 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0745518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAC ACACTTTAAG TGAACAGCAA TTGAATTCGA CACAGAATAA GGCCACTGCG
AATGGCACTC TGGCCTTAGT GGGAAATACC ATCCCGGGGC AGGAGGTGAT TTTTACCGAA
GGCGCGCTGG CGTTGCTTGA GTCACTTTGC CGTGAATTTG CGACAGAAGT GCCCACCTTA
CTCGCCAAAC GTAAAGATAG ACAGGCGCGT ATCGATAAAG GGGCTTTGCC TGACTTTTTA
CCCGAGACTC GCGCTATTCG TGATGGTGCA TGGAAGATCC GTGGCATTCC GAATGACTTA
CTCGACCGCC GCGTTGAAAT CACCGGTCCC GTCGAACGTA AGATGGTGAT CAATGCGCTT
AATGCCAATG CCAAAGTGTT TATGGCGGAT TTTGAAGACT CCTTAGCACC GAGCTGGCAG
AAAGTCGTGG AAGGTCAGAT TAACCTACGT GATGCCGTGC GCGGTGAGAT TGAGTACACA
GCGCCTGAAA CCGGTAAACA CTACAAGTTA GGCCCAAATC CTGCGGTATT AATCTGCCGT
GTGCGTGGCC TGCACTTAAA AGAAAAGCAC GTTGAATTTA ACCAGCAGTC CATTCCCGGC
GCGTTATTCG ACTTTGCGAT GTACTTTTAC CATAACTATC GCCAATTGCT GGCGAAGGGC
AGTGGCCCTT ACTTCTATAT TCCTAAACTC GAGAGCCATA TTGAAGCGCG TTGGTGGGCA
AAAGTGTTTG CTTTTGTTGA AGAAAGATTT TGCCTACAGC CTGGCACAAT CAAATGTACT
TGTTTGATTG AGACCTTACC CGCGGTGTTT GAAATGGACG AAATTCTCTA TGAATTACGC
TCAAACATTG TCGCGCTGAA CTGTGGTCGT TGGGACTATA TCTTCAGCTA TATCAAAACA
TTAAAGCGTC ATAGCGACCG TGTATTACCG GATCGCCAAG CGGTGACCAT GGATACGCCT
TTCTTAAGCG CCTATTCAAG ACTGCTGATC AAAACCTGCC ATAAACGTGG CGCACTGGCG
ATGGGCGGTA TGGCGGCCTT TATTCCCGCT AAGGATCCCG CTCAAAACGA AACCGTGTTG
CAACGGGTAC GTAAGGACAA AGAGCTTGAG GCTCGCAATG GTCACGATGG GACTTGGGTC
GCTCACCCAG GTCTTGCGGA TACGGCAATG GGGATCTTTA ACGAATACAT AGGCCAAGAT
CATCAAAACC AATTGCATAT CACCCGTGAT GTGGATGCAC CGATCCTTGC CGCAGAGTTA
TTAAAACCCT GTGATGGTGA GCGTACAGAG CAAGGGATGC GCCTGAATAT TCGCATCGCT
CTGCAATACC TTGAGGCGTG GATTAGTGGC AACGGTTGTG TGCCGATTTA CGGATTAATG
GAAGATGCGG CAACGGCGGA AATCTCCCGC GCCTCGATTT GGCAATGGAT CCAACATGGC
AAGTCACTCT CAAACGGCAA ACCCGTCACT AAACAATTGT TTAAGGACAT GCTGGTGGAA
GAGTTAGCGA ATGTGAAAAA AGAAGTGGGC GGTGACAGAT TCACCCACGG AAAATTTACC
CAAGCGGCTG TATTACTTGA GGATATTACC ACTTCGGATG AGTTGGTCGA TTTCTTAACC
TTACCCGGTT ACGAGATGCT AACGGCTTAA
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| Protein sequence | MTEHTLSEQQ LNSTQNKATA NGTLALVGNT IPGQEVIFTE GALALLESLC REFATEVPTL
LAKRKDRQAR IDKGALPDFL PETRAIRDGA WKIRGIPNDL LDRRVEITGP VERKMVINAL
NANAKVFMAD FEDSLAPSWQ KVVEGQINLR DAVRGEIEYT APETGKHYKL GPNPAVLICR
VRGLHLKEKH VEFNQQSIPG ALFDFAMYFY HNYRQLLAKG SGPYFYIPKL ESHIEARWWA
KVFAFVEERF CLQPGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT
LKRHSDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPAQNETVL
QRVRKDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HQNQLHITRD VDAPILAAEL
LKPCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG
KSLSNGKPVT KQLFKDMLVE ELANVKKEVG GDRFTHGKFT QAAVLLEDIT TSDELVDFLT
LPGYEMLTA
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