| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2826 |
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| Symbol | |
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| ID | 4255871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3347105 |
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| End bp | 3348649 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123503 |
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| Product | major facilitator transporter |
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| Protein accession | YP_738867 |
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| Protein GI | 114048317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACA GCAGTCCAAA TGCAGAGAAT GATCTGCGCG AAGTCAAGCA GTTAGGCATG
TGGGCCTCGA TCACTAGCCT AGGTTATATT TTTTGGTTAG TGGGCGGCAT GGAGCTGGTC
GAGCGTATTG CCTATTATGG CGTCAAAGCC AGTGCGGGCT TATACGCCAA GGCACCCGAG
TCGGCGGGCG GACTGGGGAT CAGCCTCAGC GACTATGGCA TCATTATTTC GCTCTGGGCC
ATAATGCAAA CCTTTGTGCC CGTGTTTACC GGCGGGATTT CCGATAGGGT CGGCTACAAG
GAAACCATTT TTGCCTCTAC CGTGATTAAA ATCATGGGCT ACCTGACCAT GGCGTTTTTC
CCCACCTTTT GGGGCTTCTT ATCGGGGGCA CTGTTACTCG CCATCGGCAC TGGGATATTT
AAACCCGGCA TTCAAGGCAC CTTAGTACTC TCCACCAACC GCAATAATAC CTCCATGGCT
TGGGGGATAT TTTACCAAGT GGTAAATATC GGTGGCTTCT TAGGACCACT CGTTGCCGTG
CATATGCGCC AGCTTTCTTG GGATAATGTG TTTTATGCCT GCGCCGCGAT TATCTCGCTA
AACTTCTTGT TCTTATTGAC GTATACCGAG CCGGGTAAGG CCGAGCGCGT TGCTCGCAAT
CAACAAATTA AATCCGGCGA AGTTAAGCAA GAAGCGCTGT GGCGCGACGC TTGGCATGAA
CTGAAAAAGC CTATCGTCAT CTATTACATG CTGGTGTTTG CTGGCTTCTG GTTCTTGTAT
AACTCCCTAT TCGACGTGCT ACCGATCCAC ATCTCCGAGT GGGTCGATAC CAGCGTGATT
GTCACTAGTC TGTTTGGCAG CGAAGGTACC AGTAACGGCA TTTTACAATT CTGGCTAGGG
TTAAATAACG AAGGCACTAA GGTGATGCCA GAAGGCATGC TGAACCTCAA CGCTGGCCTG
ATTATGACCA GCTGCTTTTT AATTGCCGCA CTGACCGCCA AATACCGCAT CACCACGGCA
ATGCTGATTG GCTGTTTACT CAGTATCTTG GCCTTTGTAT TTATCGGCGC CTTCCATGCC
GCTTGGTTTA TCGTGTTCGC CATTGCCATG TTCTCCATCG GCGAGATGAT GATCAGCCCT
AAGAAAAACG AGTTTATGGG TAACATTGCC CCCGAAGGTA AAAAAGCCAT GTACCTTGGT
TTTGTGATGC TGCCGCAAGG GATTGGTTGG GGCTTAGAAG GCTATTTTGG CCCTAAACTC
TATGAGATTT TTGCCTCTAA AGAGTTGTTT TCACGCGAGT TATTACTCGA GCGTGGCATG
AGCTCAGCGG ATGTGAATGC CATTCCACAA GGGGAAGCCT TTACCACCTT GGTGAGCTAT
ACCGGCGAAA ACGCCCATGA TCTGACTCAG CTGCTCTATC ACAGCCATAA TATCGGTATG
GCTTGGTATA TTATCGCCGC GATCGGCACC ATTTCGGCTG TAGGGATTTA TATCTATGGT
AAGTGGTTAC TGTCGCTGCA AAGGGCGCAG CAAGCCGCGC ACTAA
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| Protein sequence | MSHSSPNAEN DLREVKQLGM WASITSLGYI FWLVGGMELV ERIAYYGVKA SAGLYAKAPE
SAGGLGISLS DYGIIISLWA IMQTFVPVFT GGISDRVGYK ETIFASTVIK IMGYLTMAFF
PTFWGFLSGA LLLAIGTGIF KPGIQGTLVL STNRNNTSMA WGIFYQVVNI GGFLGPLVAV
HMRQLSWDNV FYACAAIISL NFLFLLTYTE PGKAERVARN QQIKSGEVKQ EALWRDAWHE
LKKPIVIYYM LVFAGFWFLY NSLFDVLPIH ISEWVDTSVI VTSLFGSEGT SNGILQFWLG
LNNEGTKVMP EGMLNLNAGL IMTSCFLIAA LTAKYRITTA MLIGCLLSIL AFVFIGAFHA
AWFIVFAIAM FSIGEMMISP KKNEFMGNIA PEGKKAMYLG FVMLPQGIGW GLEGYFGPKL
YEIFASKELF SRELLLERGM SSADVNAIPQ GEAFTTLVSY TGENAHDLTQ LLYHSHNIGM
AWYIIAAIGT ISAVGIYIYG KWLLSLQRAQ QAAH
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