| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2811 |
|---|
| Symbol | |
|---|
| ID | 4255892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3330803 |
|---|
| End bp | 3331372 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638123489 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738853 |
|---|
| Protein GI | 114048303 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1556] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGTA AGCACGAAAT TCTCAATGCG CTCAAACTGT CGGCTTTAAC AAACCATCCT
ATGCCAAGCA TCGATGTCGC CCCGCGGGTG GAAGATCTGG TTGGCCAGTT TGAAACCAAT
CTTAAAACCG TGGCGGGTAC ACTTCACCGC GAAGGCGGTC TTGCGGCACT GCAAGCCAAA
GTGGATGAGC TTCTCGCCAA AGGCTTACAA GTCATCTCAC TCGTTGAGGG CGTCACAGCA
AACCGTGATG TGCCACCAAC GGCTCACGAG CTCAGGGATA TCGATTATGC GGTGATCCCT
GGGGATGTTG GTGTTGCCGA AAATGGTGCC ATTTGGGTAA ACAATAAGAA CTTAGGCCAC
AGAGTAACGC CTTTTATCTG TGAAAACCTG ATCTTAGCCT TGCCAACCAA TAAGATTGTG
CCAAACATGC ACCAAGCGGC AAAAGACATC ACCTTAGATG CGGGTGAGTT TGGCGTCTTT
ATCGCAGGTC CCTCAAAAAC CGCCGATATC GAGCAAGCCC TCGTCGTCGG CGCCCACGGT
GCCTGTAGCT TGAACGTGTA TTTGCTGTAA
|
|---|
| Protein sequence | MSSKHEILNA LKLSALTNHP MPSIDVAPRV EDLVGQFETN LKTVAGTLHR EGGLAALQAK
VDELLAKGLQ VISLVEGVTA NRDVPPTAHE LRDIDYAVIP GDVGVAENGA IWVNNKNLGH
RVTPFICENL ILALPTNKIV PNMHQAAKDI TLDAGEFGVF IAGPSKTADI EQALVVGAHG
ACSLNVYLL
|
|---|
| |