Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2803 |
Symbol | |
ID | 4255884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3318581 |
End bp | 3319462 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123481 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_738845 |
Protein GI | 114048295 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.141503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.75892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAGTCA ATGCAATAAA AGAATATCAA CTACGGGTTG ATGACCAATT AAAACAACGT TTCAGCACAC TCGAAGACAC TGCGGCACAA TTAAAGGCCG CCATGACCCA CGGCGCGCTG TTAGGCGGTA AGCGTATTCG TCCCTTCTTG GTTTACAGTG TGGGGCAAAT GTTTGGCGTG TCGCTTGAAA AGCTCGACGC CTGCGCCGCC GCCATTGAGT GTATTCATGC TTATTCGTTA ATCCATGACG ATTTACCCGC CATGGACGAT GACGACCTTC GTCGTGGTCA ACCCACAGTG CATATCGCCT TCGATGAGGC GACCGCGATT CTCGCTGGGG ATGCCCTGCA AACCTTAGCC TTTGAAATTG TTACCGAAGC TGTACCAGGG ATCAGCAGCG AGCAGCATAT CGCTATGGTG AGAGCGCTGG CGAAAGCCTC GGGTTACCGT GGTATGTGTG GCGGCCAAGC GATTGACTTA GCCTCAACCG ATAAGCTCAT CGACCTTAAG GCCCTAACTC AACTCCACAA TATGAAAACG GGCGCCCTTA TCAGCTGCGC CGTTGAGTTA GCCCTGATTG CCGCTAATGC GCCAAAAGAT GAATATCAGA CTATGATGGA ATTTGCCCAT GCGGTAGGAC TTGCCTTCCA AGTGCAAGAC GATATTCTGG ACATCATTGC CACCACGGAA GAACTCGGCA AACCCCAAGG CTCTGACGCC GAGTCCAATA AGAGTACTTT TCCGCAACTA CTTGGACTGC AAGGCGCCAA AGATACCGCC GCGCAACTGA TCCAAGAGGC ACTATCAGCG CTGGCTAAAT TGCCATACAA TAGCCAGTTA ATCGCAGACT TCGCCCGCTA TATCATTGAG CGAAGAATAT AA
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Protein sequence | MLVNAIKEYQ LRVDDQLKQR FSTLEDTAAQ LKAAMTHGAL LGGKRIRPFL VYSVGQMFGV SLEKLDACAA AIECIHAYSL IHDDLPAMDD DDLRRGQPTV HIAFDEATAI LAGDALQTLA FEIVTEAVPG ISSEQHIAMV RALAKASGYR GMCGGQAIDL ASTDKLIDLK ALTQLHNMKT GALISCAVEL ALIAANAPKD EYQTMMEFAH AVGLAFQVQD DILDIIATTE ELGKPQGSDA ESNKSTFPQL LGLQGAKDTA AQLIQEALSA LAKLPYNSQL IADFARYIIE RRI
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