Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2797 |
Symbol | |
ID | 4258412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3313275 |
End bp | 3314078 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123475 |
Product | integrase catalytic subunit |
Protein accession | YP_738839 |
Protein GI | 114048289 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.16027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0659937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGGC AAGGTATTTA TCAGGCAGTT GCTCGAATGG AAAGTCGTAG AGCTGAGCTA TCGGTCATCA AAGACTGGGT CCAGTACTGG CGTAAATATA TGCCAAGGTT AGGGGCCCGT AAGCTCTACA CGTTGATAAA ATCCAAGCTG GTTGAGCACG ATATTAAACT CGGGCGAGAT GGGTTCTTTA CCTATTTGAG AAGTGAAGGT TTACTGGTTA AACCGAAGAA AAGCTACACC AAAACCACGT TCAGCAAACA CTGGATGAAG AAGCATCCTA ATCTGCGGAA AGAGGAGGGA CTGCACGATG CAGGGCATGT ACTGGTCAGC GATATCACCT ATCTTGAGTC AGACCAAGGT GTGCACTACC TGTCACTGAT CACCGATGCC AGTTCTCGTA AAATAGTCGG TCATCACGTG AGTAAAGACA TGAAAGCCGA GAGTGTGGTG AAAGCGTTAA AAATGGCCAT CAAAGATAAG CGCTATATCG GCAACGCGGT GCATCACTCA GACAGAGGCT TACAGTACTG CTCAGCCGTT TATCAGAATG CGCTTCAGGC GAGCCAAATC CAGCCGTCAA TGACGGATGG TTATGATTGC TACCAAAATG CATTAGCAGA AAGAGTGAAT GGCATACTGA AGCAGGAGTT TTTACTGCAC CGATGTAGGA CATTTGCGGA GCTGAAGATA CTTGTTAGAG AATCGATAGC AATATACAAC AATATGAGAC CGCATCTGAG TTTGAATATG GCAACCCCTA ATCAGGTGCA CAATAGAAAA GGCCAGCTAC TGGAGCTGGC CTAA
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Protein sequence | MSRQGIYQAV ARMESRRAEL SVIKDWVQYW RKYMPRLGAR KLYTLIKSKL VEHDIKLGRD GFFTYLRSEG LLVKPKKSYT KTTFSKHWMK KHPNLRKEEG LHDAGHVLVS DITYLESDQG VHYLSLITDA SSRKIVGHHV SKDMKAESVV KALKMAIKDK RYIGNAVHHS DRGLQYCSAV YQNALQASQI QPSMTDGYDC YQNALAERVN GILKQEFLLH RCRTFAELKI LVRESIAIYN NMRPHLSLNM ATPNQVHNRK GQLLELA
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