Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2794 |
Symbol | |
ID | 4258409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3311257 |
End bp | 3311928 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123472 |
Product | hypothetical protein |
Protein accession | YP_738836 |
Protein GI | 114048286 |
COG category | [R] General function prediction only |
COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00486686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0665218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTGTT GCCCGGATAA TCCTTTGGTC AACGAGGATG TTGCGTCAAG TGCCTATGTG TTAGAAGGCT CGCCATCAGA AACCTTGATT TTATTTGCCC ACGGCGCGGG AGCGAATCGA GATTCCGACT TTATGTGCCA AATGGCCGCA GGTCTTGTCG CCAAGGGCTT TCAAGTGATG CGCTTTAACT TTCCCTACAT GCAGGCCAAT GCTGTGGATG GTAAAAAGCG CCCCCCTGAC AGAGCGCCAA AGTTGCTTGC CTGTTTTAGC GAGATGCTCG ATGTGGCGCA CGCTCAGCCT ATGGTTAAGC GTGTAGTCTT GATGGGCAAA TCCATGGGCG GACGCATGGC GGCGTTACTG GCCTGCGATA GTGCGCAAGC GAGCCGTATC GACAGCGTCA TTTGTTTAGG TTATCCCTTT ATTCCGCTTA AGGGCGGTGA ACCTAGGTTA GAACCCCTAA ACGACTGCCA AGTGCCGGTG TTAGTGCTGC AAGGGGAGCG GGATAAGTTT GGCGGTAAGA TGCAAATCCC TAGCTGGCCG CTTAAGCGCG ATATCCAAAT TGAATACTTA GCCGATGGGG ATCATAGTTT TGTCCCAAGA AAGTCGTCAG GCACGACCGA AGCGGCTAAC CTTGCATTGG CTGTTGATTT ATCAGAAAAA TTTATTGGTT AG
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Protein sequence | MSCCPDNPLV NEDVASSAYV LEGSPSETLI LFAHGAGANR DSDFMCQMAA GLVAKGFQVM RFNFPYMQAN AVDGKKRPPD RAPKLLACFS EMLDVAHAQP MVKRVVLMGK SMGGRMAALL ACDSAQASRI DSVICLGYPF IPLKGGEPRL EPLNDCQVPV LVLQGERDKF GGKMQIPSWP LKRDIQIEYL ADGDHSFVPR KSSGTTEAAN LALAVDLSEK FIG
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