Gene Shewmr7_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2794 
Symbol 
ID4258409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3311257 
End bp3311928 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID638123472 
Producthypothetical protein 
Protein accessionYP_738836 
Protein GI114048286 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00486686 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0665218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTGTT GCCCGGATAA TCCTTTGGTC AACGAGGATG TTGCGTCAAG TGCCTATGTG 
TTAGAAGGCT CGCCATCAGA AACCTTGATT TTATTTGCCC ACGGCGCGGG AGCGAATCGA
GATTCCGACT TTATGTGCCA AATGGCCGCA GGTCTTGTCG CCAAGGGCTT TCAAGTGATG
CGCTTTAACT TTCCCTACAT GCAGGCCAAT GCTGTGGATG GTAAAAAGCG CCCCCCTGAC
AGAGCGCCAA AGTTGCTTGC CTGTTTTAGC GAGATGCTCG ATGTGGCGCA CGCTCAGCCT
ATGGTTAAGC GTGTAGTCTT GATGGGCAAA TCCATGGGCG GACGCATGGC GGCGTTACTG
GCCTGCGATA GTGCGCAAGC GAGCCGTATC GACAGCGTCA TTTGTTTAGG TTATCCCTTT
ATTCCGCTTA AGGGCGGTGA ACCTAGGTTA GAACCCCTAA ACGACTGCCA AGTGCCGGTG
TTAGTGCTGC AAGGGGAGCG GGATAAGTTT GGCGGTAAGA TGCAAATCCC TAGCTGGCCG
CTTAAGCGCG ATATCCAAAT TGAATACTTA GCCGATGGGG ATCATAGTTT TGTCCCAAGA
AAGTCGTCAG GCACGACCGA AGCGGCTAAC CTTGCATTGG CTGTTGATTT ATCAGAAAAA
TTTATTGGTT AG
 
Protein sequence
MSCCPDNPLV NEDVASSAYV LEGSPSETLI LFAHGAGANR DSDFMCQMAA GLVAKGFQVM 
RFNFPYMQAN AVDGKKRPPD RAPKLLACFS EMLDVAHAQP MVKRVVLMGK SMGGRMAALL
ACDSAQASRI DSVICLGYPF IPLKGGEPRL EPLNDCQVPV LVLQGERDKF GGKMQIPSWP
LKRDIQIEYL ADGDHSFVPR KSSGTTEAAN LALAVDLSEK FIG