Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2789 |
Symbol | |
ID | 4258404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3304262 |
End bp | 3304987 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123467 |
Product | GntR family transcriptional regulator |
Protein accession | YP_738831 |
Protein GI | 114048281 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.061235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTCGAG ATGACATTTT GAATACCTTT AAACCCGTTA AGCAGTTAAG AGCATCGACA GAAGTTGGAC AGCAACTCAA AGAGGCCATT ATTGACGGCA GGTACAAAGC TGGGGATAAA CTTCCTTCGG AGCGAGAGTT AATCGAGCTG TTTATGGTCA GCCGTACTGT GGTCAGAGAG GCCGTAAAAA TCCTCGAAGC AAGTGGTCTA GTTGAGATTC GTCAGGGTGC CATGGGAGGC GCCTTTGTAA AGCAGGTCGA CTACGAGCGT TTAAGCGATG CCTGTCGGGA TCTACTCACT ATGGGCAAAA TGTCGTTGCC TGAAATTGTC CAGGTCAGGA TGTTGCTCGA ACCACAGGTT GCCCGTTTAG CCGCGAAAAA CTGCACGGCC GAACAAGCGG CAAGATTGCA TGATGCTAAT CAGCATGAAA ACGATACCTT AGAATATCCC GACACAGTGT ATTTACGTTC CCAAGTGCAT TTTGTGTTGG CCGAAATTTG CGGCAATCGT TGCTTAGAAG CCATTAGTAA ATCGCTGCTG TTGTTATTAC GTCGAAATAC CTTAACCTTG AAACCGCCGA CTGACGAAAT CCATCCCTCT GGTTCACATG ATAAATTGGT TCAGGCTGTT GTTAATGGGG ATGAAGACCG AGCCGAAGCA GAGATGCGTG CCCACTTGGA AGACTTTTGT AACAGAGTGG CCGAGGTTGA GCGTAAATAC AGATAA
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Protein sequence | MIRDDILNTF KPVKQLRAST EVGQQLKEAI IDGRYKAGDK LPSERELIEL FMVSRTVVRE AVKILEASGL VEIRQGAMGG AFVKQVDYER LSDACRDLLT MGKMSLPEIV QVRMLLEPQV ARLAAKNCTA EQAARLHDAN QHENDTLEYP DTVYLRSQVH FVLAEICGNR CLEAISKSLL LLLRRNTLTL KPPTDEIHPS GSHDKLVQAV VNGDEDRAEA EMRAHLEDFC NRVAEVERKY R
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