| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2784 |
|---|
| Symbol | xni |
|---|
| ID | 4258084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3298961 |
|---|
| End bp | 3299743 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123462 |
|---|
| Product | exonuclease IX |
|---|
| Protein accession | YP_738826 |
|---|
| Protein GI | 114048276 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.435309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0225112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGT TTTTAATTAT CGATGGTCTC AACTTAGTTC GCCGGATTTA CGCGGCGATC
CCAGATGAGA ACGATATGGA CAGTTTAACG GACCGCGTGA GCGTTGCCTG TACTAAACTG
CTGCGCATTC ACCACCCTAC CCATGTCGCC ATCGTCTGGG ATGGTGATGA GATCTCTTGG
CGTAAACAGC TTTACCCTGA CTATAAAAAG GGCAGAAAAC CTATGCCTGA GCCACTGGCC
GCGGGCTTGT CAGCACTACA GGAACACCTT AAGAGCTTAC CAATCCAATC GATTTATGCC
GCCGCCGAGG CCGATGATGT TATTGCCACC CTTGCGATGA AAACCGCCAA GGCTCAAGGT
GAAGCCGTTA TCGTGTCGAC GGACAAGGGT TTTAGTCAGC TCAATCATCC GCGGATCAGC
CAGTGGGACC ACTTTAATCA GCAATATTTA AATATCGCAG AACTAGAGCA AAAACTGGGG
GTTGATCGCA ACCAATTTCT TGATTTAATG GCACTTGCTG GAGATAGCGG CAATAAAATC
CCCGGTATTG CAGGCATTGG CCCCAAATCG GCCGCCGAAT TACTCAGAAC CTTCAGAACC
TTAGCAACAC TGTTTTCCTC TCTATCCAAT CTCGGTGCGA AACAAGCCAA GAAACTGGCC
GAAGGGCGAG ATATGGCTCG CCTAAGCTAT AAATTGGCAC AGCTACAAAC CGATTTACCC
TTGAACATCA ACCTAAGGGA TTTTAGGGTC AACGGCCCCG CCAATACGCA GCAGGCAGAA
TAA
|
|---|
| Protein sequence | MNKFLIIDGL NLVRRIYAAI PDENDMDSLT DRVSVACTKL LRIHHPTHVA IVWDGDEISW
RKQLYPDYKK GRKPMPEPLA AGLSALQEHL KSLPIQSIYA AAEADDVIAT LAMKTAKAQG
EAVIVSTDKG FSQLNHPRIS QWDHFNQQYL NIAELEQKLG VDRNQFLDLM ALAGDSGNKI
PGIAGIGPKS AAELLRTFRT LATLFSSLSN LGAKQAKKLA EGRDMARLSY KLAQLQTDLP
LNINLRDFRV NGPANTQQAE
|
|---|
| |