| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2780 |
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| Symbol | |
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| ID | 4258080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3291713 |
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| End bp | 3293524 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123458 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_738822 |
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| Protein GI | 114048272 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.226266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00190153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACCCT GTAGATTATC TATTTTGGTA TTAAGTGTAT TAGGGTCGGC TAACGTATTT
GCCGATGTGG ATTACAAAAT TGATTTAAGC CAACCAGAAC ATCACCTTGC GAAGGTGAGT
GTGACCTTCC CCGAGGCTAA AGCGGGTGAG TTCAATGTCA ATCTTCCCGT GTGGCGTACG
GGCAAATACC AAGTGTTACC TTTATCCGAC GGTGTGCGTT TATTTAGCGC GACCGACGCA
CGAGGCAACG CGCTACCATG GAAACGCACC GCCAGCGGTG AATGGCAAAT AGCCCTCGAT
AAGCCCACCA GCGTGACAGT GAATTATCAG CTCTATGCCA ATGAATTAGG TCAACGTGTG
CGTCATATCG ATGCTACCCA CGCCTATTTA GATGCCAGTG GCGTATTTAT GTATAGCCCG
CAATTTCGAG CCGATGCTGT TGCAGTACAA TTAACGGTTC CCGAAAACTG GCAAAGTTAT
TCGGGTATGT CGTCAGGCAA CGCGGCGCAT TCCTTTGTGG CGCCTAATTA TGATGTGCTG
ATTGATTCGC CCATCGAAAC TGGCGTGAGC ACCCACAAAA CCTTCAGTGC TAATGGTAAA
GACTATGAGT TAGTGCTGTG GGGCGAAGGC AACTACGATG CCGACAAGGT GGTGAAAGAT
TTAACCGCGC TGAGTGGTCA AGCCAAGGCT ATTTGGGATG GTTATCCCTT TGAGCGTTAT
GTGTATATGG TGCACGCCAC TAGCGGCGCG AGTGGCGCAA CCGAACATTT GAATTCGACG
GTCATCCAAC TGCCTCGGTT TAGTTTTCGC GAGCGTAAGG ACTACCTACG CTTTATCAGC
ACCGCCTCCC ATGAGTTTAT TCATACCTGG AACGTTAAAG CCTATCGTCC AGCGGGTTTG
GTCCCTTACG ATTATCAGCA TGAAAACATG ACCGAACTTT TGTGGATTGC CGAGGGCTCG
ACCAGTTATT TCCAAGGTCA GTTACTGCTG CGTGCGGGAG TGATGACACC TAAGGAGTTT
TTAGAAGATC TTGCTAAACG CATTGAGAAG AGTGAGCTGA CTCCCGGACG CGAAATTCAA
TCTGTGGCCG AGGCCAGTTT AGGGGAGTGG AGCAGCACGG GTGGTGATTA TGCCATTAAC
CATAGTGTGA ATATTTACTC TGAAGGTTAT TTAGCCTCAC TGGCGCTGGA TTTCTCTCTG
CTGACCGACT CGAATCTTGC CCACTCGTAC CGCGATGTAC ATCGTAAACT CTATCAGGAT
TACCGCGTGC CTAAGGGTTA CACTGTGGCC GATGTGCGGC AAATTCTGAA GGACTTATCG
GGTAAGGATT ATGGCCCCTG GTGGCAGAGC CATGTGAATA GTCCGCTGAG TCTTGAGTTT
TCAAGCCTGT TGTCTCAGGC TGGATTAGTG ATGTCCTATG GTAAAGACTC CAAAGCTGAG
CCTTTTACGG GCATGACCTT AAGCAGCGAA CATGGCTCTT TAGTGCTTTC TCAAGTCTTG
CGTAATGGCC CTGCTTGGCA GGCCGGTATC GTGGCTGGAG ATGAGATCCT CGCGATTAAT
GGCTTAAAGG TCACGGCACA AGGTTTTGAT AAACGCATCA AAGACTTTAA AGTGGGTGAT
AAAGTCGATA TCACCTTATT TAACAACGAC AAAATCAAGC AAGTGACTTT AATCTTAGGT
GAGAAACAAA GCGGTAAGCT AGTGCTAAAA GGCGATGCGA AGGCGAATAA GCAGCAAAAA
GCCTTCTTCA AAGCCTGGCT TGGCATTGAT TGGCCGTTCG ATAATAAGGG TGACCTGCTG
ACGAAAAGCT AA
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| Protein sequence | MKPCRLSILV LSVLGSANVF ADVDYKIDLS QPEHHLAKVS VTFPEAKAGE FNVNLPVWRT
GKYQVLPLSD GVRLFSATDA RGNALPWKRT ASGEWQIALD KPTSVTVNYQ LYANELGQRV
RHIDATHAYL DASGVFMYSP QFRADAVAVQ LTVPENWQSY SGMSSGNAAH SFVAPNYDVL
IDSPIETGVS THKTFSANGK DYELVLWGEG NYDADKVVKD LTALSGQAKA IWDGYPFERY
VYMVHATSGA SGATEHLNST VIQLPRFSFR ERKDYLRFIS TASHEFIHTW NVKAYRPAGL
VPYDYQHENM TELLWIAEGS TSYFQGQLLL RAGVMTPKEF LEDLAKRIEK SELTPGREIQ
SVAEASLGEW SSTGGDYAIN HSVNIYSEGY LASLALDFSL LTDSNLAHSY RDVHRKLYQD
YRVPKGYTVA DVRQILKDLS GKDYGPWWQS HVNSPLSLEF SSLLSQAGLV MSYGKDSKAE
PFTGMTLSSE HGSLVLSQVL RNGPAWQAGI VAGDEILAIN GLKVTAQGFD KRIKDFKVGD
KVDITLFNND KIKQVTLILG EKQSGKLVLK GDAKANKQQK AFFKAWLGID WPFDNKGDLL
TKS
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