| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2752 |
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| Symbol | |
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| ID | 4258488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3259897 |
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| End bp | 3262269 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638123430 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_738794 |
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| Protein GI | 114048244 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4192] Signal transduction histidine kinase regulating phosphoglycerate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.296957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ACTATTTTAA AATACCCACA TCTTTAGGCG GAAAATTAAT GCTCGCCTTT
GCGAGCATGA CATTTTTAAA TCTTTTTATT GGTATTACCA CAGTACTGAT TTGGGAGGAG
CTCAGTAATA AAATCAATCA TATTGTCGAG CATAGTCTCC CTCCCCTTAA TGGGGCTTAT
ATTCTTGAGC GCTCCAGTGG CAACCTGCAA AGCATTATCT CTAACAGTTA TAAAATTAAA
GACGAGCTCG GTTATCAAAA TTTTGAGAAC GATTTAAAAG ATGAAATTGA AACCATTAAG
CAAGCCTATA TCAGCAGTAA TCCCGATCAT CAATTGCTCG CAGAGCAGCG GCAGGCACTC
GAACACTTTT CGAACTTAAT TGAGCAACAG GATTCATTGT TAAAGCAAAA AATTGCTTAT
AGTCAAGAGC TTGATAATCT TCAAAAACGT ATCACTTGGT TGCATCAAGA TCTCAATGAT
GAAATGACTC CTTTGATGCA GGAAGTCGAA TGGCATGTCA CCCGATTACT CTCGCAGCCT
GTCGATAATC TATCGCCAAA TGCCCTGATG AATGAGTTCT TTATTCTGCA GGAATTATCG
ATCAAGGAGA CTGAGCTATT TACCCTAGTG AATGAGATTA TTGACCAGAG ATACACGCGA
GAACTAACCA GTGCCTTCTC ATATCTGGAT CAGAAAATCG CCGAAATTGA AACCTTAGTG
GAGAAACTCA CCAGCTTCCC TTCGACAATT AGCCATCGAC AAATCATGAA GAATTTAATC
ACCCTGATTA GCTCTAATGG TGAATTAATC CGACTGCTCA AACTCGATAC CCAGGCGCAA
TTGGCGTTAT CCCAGTTAGC CGAACCGTTA ACCCAAGTGT TAACCCAATT TCACCTCAAG
AACATTGCGA CACTCGAACA ATCGAGCCAA GCGTTTAACT CCCTCAATAC CAACACTAAG
TCGATGATCA TCAATGGCAA ATTGATAATT GTGCTTATAT CTATCATCTC TATTGTGATC
AGTGTATTAG TGCTGACTGT GCTTATCCGC CAAAGGGTAT TAAAACGCCT CAACACCCTA
GAGATTGACC TGAAAAATGT GGCCGACGGC CATTTAGATT GGCCTATCAC CACCCAAGGG
AAAGACGAAA TTGGCCATAT GGGCGACTGT TTACGGCAGT TCTGTGTCGA TATGCAGGCC
ATGGTCAAAA GCAATGCGCT CACCCTAATT AATAACGCCC AAGCCAGCTT GATCACCTGT
CATCCCAATG GCGAAATCGA ATCCGCTAAC CCACATGCAT TGCAGTTATT GAGTCTGAGC
ACACTCGCAC CGCACTTGAC CCTATGGCAG GCCTTTCCCG CCGCCTGCCA ACCACAATTA
TCTGAGCTGT TCGCCGCCGA CAGCGAGCTA AGCCGAACAG GCCAAAGTGA ATGTATTCTC
AATTTAGTGA AACATAACGC GCCGCAATAC TTACATTTTC ACCTGCAGGC TTTCGAACAT
GCTCGCCAAG CCAAGTATAT GGTCACTATT ACCGACATCA CTAAGCAAGA ACTCAATACC
CGTGAACTCG AGCATATAGT GGCGGATAGA ACCTTAAACC TCACAGTGAA AAACCAAGAG
TTAACCGCAG AAATTGAGCA ACGCAAACTG GCGGAAGCAC ATTTGCATCA GGCACAGGCG
GACCTTATCC AAGCGGCCAA AATGGCGGCG GTCGGCCAAA CCATGACTAG CCTTGCCCAT
GAGTTAAACC AGCCGCTGTC GGCCGTCAGC ACCTACTTGT ACAGTTGCCG CTTGGCGCTT
GAGACCAATC AACTCGAGTT ACTCACTGAG ATGCTAGGCA AGACGGAAAA GATGAACCTT
AGGATGGCAA AAATTATTTC GGCTATCCGT AACTTTGCGC GCAAGTCCCC CACGCAGGTG
GAGAGCGTCA GTATCGATAT TAATCAACTG GTGAATAACG CGCTGGTACT GGTCGAAACC
CGTGCGCGAA ACGAAAACAT CATCATTCAT AATGAGTTAA CTAAAGAATA TCTTATCCAA
GTGGATGCGG TTCAAGTCGA GCAAGTGCTG CTCAACATCC TGATTAATGC CATGGATGCC
ACCGCAAGCC AGGTCGATAA ACATATCTAT GTGACTGTGC TTGAACAAAG TCCAGCCAAA
CTGACGCTGG CCATTTATGA CAATGGGCCG GGATTTGCGC AAAATATTCT TCCGCAAATT
TTCACCCCCT TTACCACCAC CAAGGCCGTT GGTCTAGGCT TAGGATTGAG CATCTGCCGC
TCGATTCTCG AACGTTTTAA CGCTGACATT TATCTGGCAT CACACTTAGA TGGCGGCGCT
ATGATTATTT TGGAGTTCCA CAATGCCGAT TGA
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| Protein sequence | MKKNYFKIPT SLGGKLMLAF ASMTFLNLFI GITTVLIWEE LSNKINHIVE HSLPPLNGAY
ILERSSGNLQ SIISNSYKIK DELGYQNFEN DLKDEIETIK QAYISSNPDH QLLAEQRQAL
EHFSNLIEQQ DSLLKQKIAY SQELDNLQKR ITWLHQDLND EMTPLMQEVE WHVTRLLSQP
VDNLSPNALM NEFFILQELS IKETELFTLV NEIIDQRYTR ELTSAFSYLD QKIAEIETLV
EKLTSFPSTI SHRQIMKNLI TLISSNGELI RLLKLDTQAQ LALSQLAEPL TQVLTQFHLK
NIATLEQSSQ AFNSLNTNTK SMIINGKLII VLISIISIVI SVLVLTVLIR QRVLKRLNTL
EIDLKNVADG HLDWPITTQG KDEIGHMGDC LRQFCVDMQA MVKSNALTLI NNAQASLITC
HPNGEIESAN PHALQLLSLS TLAPHLTLWQ AFPAACQPQL SELFAADSEL SRTGQSECIL
NLVKHNAPQY LHFHLQAFEH ARQAKYMVTI TDITKQELNT RELEHIVADR TLNLTVKNQE
LTAEIEQRKL AEAHLHQAQA DLIQAAKMAA VGQTMTSLAH ELNQPLSAVS TYLYSCRLAL
ETNQLELLTE MLGKTEKMNL RMAKIISAIR NFARKSPTQV ESVSIDINQL VNNALVLVET
RARNENIIIH NELTKEYLIQ VDAVQVEQVL LNILINAMDA TASQVDKHIY VTVLEQSPAK
LTLAIYDNGP GFAQNILPQI FTPFTTTKAV GLGLGLSICR SILERFNADI YLASHLDGGA
MIILEFHNAD
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