Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2744 |
Symbol | |
ID | 4258744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3252235 |
End bp | 3252783 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123422 |
Product | transport-associated |
Protein accession | YP_738786 |
Protein GI | 114048236 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA CGACAACTTT AGCCTTAACC ACCTTACTTG TCGGTTCTAT CAGTTTAAAT GTGGCCGCCG CACAGGATTG GAAAGACGAT GCCAAAGATG CTTGGCTAGA TGGCAAGGCC GAAACGACTT TGTTGCTCAA TACTAACCTC AACTCCTTTG ACATTATGAC TGACGTGAAA AACGGCCATG TCACCTTAAC CGGTCAAGTG GAGAGCAGTG TCGATAAGGC GCTCGCCGCT GAGCTCATCA AAAGCTTAGA TGGCGTAAAA GGGGTCGATA ACAAATTAAC CGTGATGAAT GAAGACGAAG GCACCAATGA GGTGGTGAAG ACCTTAACCG ACTCTAAGGT TGCAACGGTC GTAAAAACTC GTCTGTTGTT TTCGACCGAC GTATCGGGCA CCCAAATTAA CGTCGACGTT GCCGATGGCG TAGTGACCTT ACAGGGTGAA GTGGCGAGCG ATGCCGAGCG TCAATTAGCC CTGACCATTG CCGAAAACAC CGATGATGTG AAAAAGGTCG TCGATAAAAT CAAAGTCAAA ACCTCATAA
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Protein sequence | MKNTTTLALT TLLVGSISLN VAAAQDWKDD AKDAWLDGKA ETTLLLNTNL NSFDIMTDVK NGHVTLTGQV ESSVDKALAA ELIKSLDGVK GVDNKLTVMN EDEGTNEVVK TLTDSKVATV VKTRLLFSTD VSGTQINVDV ADGVVTLQGE VASDAERQLA LTIAENTDDV KKVVDKIKVK TS
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