Gene Shewmr7_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2744 
Symbol 
ID4258744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3252235 
End bp3252783 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID638123422 
Producttransport-associated 
Protein accessionYP_738786 
Protein GI114048236 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CGACAACTTT AGCCTTAACC ACCTTACTTG TCGGTTCTAT CAGTTTAAAT 
GTGGCCGCCG CACAGGATTG GAAAGACGAT GCCAAAGATG CTTGGCTAGA TGGCAAGGCC
GAAACGACTT TGTTGCTCAA TACTAACCTC AACTCCTTTG ACATTATGAC TGACGTGAAA
AACGGCCATG TCACCTTAAC CGGTCAAGTG GAGAGCAGTG TCGATAAGGC GCTCGCCGCT
GAGCTCATCA AAAGCTTAGA TGGCGTAAAA GGGGTCGATA ACAAATTAAC CGTGATGAAT
GAAGACGAAG GCACCAATGA GGTGGTGAAG ACCTTAACCG ACTCTAAGGT TGCAACGGTC
GTAAAAACTC GTCTGTTGTT TTCGACCGAC GTATCGGGCA CCCAAATTAA CGTCGACGTT
GCCGATGGCG TAGTGACCTT ACAGGGTGAA GTGGCGAGCG ATGCCGAGCG TCAATTAGCC
CTGACCATTG CCGAAAACAC CGATGATGTG AAAAAGGTCG TCGATAAAAT CAAAGTCAAA
ACCTCATAA
 
Protein sequence
MKNTTTLALT TLLVGSISLN VAAAQDWKDD AKDAWLDGKA ETTLLLNTNL NSFDIMTDVK 
NGHVTLTGQV ESSVDKALAA ELIKSLDGVK GVDNKLTVMN EDEGTNEVVK TLTDSKVATV
VKTRLLFSTD VSGTQINVDV ADGVVTLQGE VASDAERQLA LTIAENTDDV KKVVDKIKVK
TS