| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2736 |
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| Symbol | |
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| ID | 4258736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3243888 |
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| End bp | 3245540 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123414 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_738778 |
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| Protein GI | 114048228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATA CCACACTCGA TAATAATAAG CTCAGTCCTT GGCCATGGCA GGTTGATGAA
GCCGCCATCA GTTTCGATAT CGATTCCCTT GGCAAAAAAC TTAAAGATCT CAATCAAGCC
TGTTACTTAG TCAATCATGC CGAAAAAGGC CTAGGCATAG CCCAAAGTGC CGAGGTGGTG
GGTCTTGCAG AAGCTCAACC CTGCAATGGC TTAAACAAAA GTAATGGGTT GCATCCTGTG
AGTGCCTTCG CCCCCGCCCT TGGCACCCAA AGCTTGGGTG ACAGTAACTT TCGCCGTGTG
CATGGGGTGA AATACGCCTA CTACGCGGGC GCCATGGCCA ACGGCATCGC CTCGGAAGAG
TTAGTTATCG CCTTAGGTCA GGCGGGCATT TTGTGCTCCT TTGGCGCGGC AGGGTTAATT
CCATCGCGCG TTGAAGCCGC GATTAAACGC ATTCAAGCGG CATTGCCCAA TGGCCCCTAC
GCCTTTAACC TCATTCACAG CCCGAGCGAG CCAGCGCTTG AGCGTGGCAG TGTCGAACTC
TTCCTTAAGC ATCAAGTGCG TACGGTTGAG GCCTCGGCCT TCTTGGGCTT AACACCGCAA
ATCGTCTATT ACCGCGCCGC AGGCCTGAGT CGCGACGCCA ACGGCGAGAT TGTGATTGGC
AATAAAGTGA TTGCTAAAAT CAGCCGTACC GAGGTGGCGA CCAAGTTTAT GGAGCCCGCC
CCGGTTAAGA TGCTGCAACA ATTAGTGAAC GAAGGGCTTA TCAGCGAAGA TCAAATGTTG
ATGGCGCAAT CTGTCCCAAT GGCCGATGAC ATTACCGCCG AAGCCGACTC TGGCGGCCAC
ACCGACAATC GCCCACTGGT CACGTTATTA CCGACCATTT TGGCGCTCAA AGATAGCATT
CAAGCCAAGT ACCAGTACAA AACGCCGATC CGTGTGGGCG CAGGTGGTGG TATCGGCACG
CCCGATGCGG CGCTGGCGAC CTTCAATATG GGCGCGGCCT TTATTGTCAC TGGCTCAATC
AATCAAGCCT GTGTTGAGGC AGGAGCCAGC GAACATACCC GCAAGTTGCT CGCCACCACT
GAAATGGCCG ATGTGACTAT GGCGCCCGCC GCCGATATGT TTGAAATGGG CGTTAAGTTA
CAAGTGGTTA AGCGCGGCAC TCTATTCCCG ATGCGCGCCA ATAAGCTCTA TGAGATTTAC
ACCCGCTACG ACTCGATTGA GGCGATTCCG GCAGAGGAAA GACAAAAGCT GGAAGAGCAA
GTGTTTCGCG CGTCATTAGA TGAGATTTGG GCAGGCACTG TAGCGCACTT TAATGAGCGC
GATCCCAAAC AAATTGAACG CGCGCTGGAT AACCCAAAAC GCAAAATGGC ACTGATTTTC
CGCTGGTATT TGGGTCTTTC GAGCCGCTGG TCAAACACGG GCGAAGTTGG CCGCGAAATG
GATTACCAGA TTTGGGCAGG CCCCGCCCTC GGCGCCTTTA ATGCCTGGGC AAAAGGTAGT
TATTTAGATG ATTACCGCGA GCGTAATGCG GTCGATTTGG CGAAACATTT AATGCAAGGC
GCGGCCTACC AAGCACGGAT TAACCTGTTG TTATCCCAAG GGGTAAGTAT TCCAGTCAGC
CTGCAACGCT GGAAACCACT GCAACGCTGT TAA
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| Protein sequence | MTNTTLDNNK LSPWPWQVDE AAISFDIDSL GKKLKDLNQA CYLVNHAEKG LGIAQSAEVV
GLAEAQPCNG LNKSNGLHPV SAFAPALGTQ SLGDSNFRRV HGVKYAYYAG AMANGIASEE
LVIALGQAGI LCSFGAAGLI PSRVEAAIKR IQAALPNGPY AFNLIHSPSE PALERGSVEL
FLKHQVRTVE ASAFLGLTPQ IVYYRAAGLS RDANGEIVIG NKVIAKISRT EVATKFMEPA
PVKMLQQLVN EGLISEDQML MAQSVPMADD ITAEADSGGH TDNRPLVTLL PTILALKDSI
QAKYQYKTPI RVGAGGGIGT PDAALATFNM GAAFIVTGSI NQACVEAGAS EHTRKLLATT
EMADVTMAPA ADMFEMGVKL QVVKRGTLFP MRANKLYEIY TRYDSIEAIP AEERQKLEEQ
VFRASLDEIW AGTVAHFNER DPKQIERALD NPKRKMALIF RWYLGLSSRW SNTGEVGREM
DYQIWAGPAL GAFNAWAKGS YLDDYRERNA VDLAKHLMQG AAYQARINLL LSQGVSIPVS
LQRWKPLQRC
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