| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2735 |
|---|
| Symbol | |
|---|
| ID | 4258735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3237829 |
|---|
| End bp | 3243759 |
|---|
| Gene Length | 5931 bp |
|---|
| Protein Length | 1976 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638123413 |
|---|
| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
|---|
| Protein accession | YP_738777 |
|---|
| Protein GI | 114048227 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3321] Polyketide synthase modules and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTTC ACCCGACTCA GCAAAACAGC ACAGCTGTGC CAAACGACCA GCGCCAAAAC
TCAAAGGCGA TGCCAAAGAT CGCCATTGTC GGCCTTGCCG TTCAGTATCC CGATGCCGAC
ACTCCGGAGC AGTTTTGGCA AAATCTGCTG GATAAAAAAG ATTCACGCAG CCAAATCGAT
GCGGTCAAAC TCAATGCCAA TCCAGCAGAT TACCAAGGAG TTCAAGGCCA AGCCGACCGT
TTTTATTGCG ACAAGGGCGG CTATATCCGC AACTTTCGTT TTGACCCGCA GGGTTATCAG
CTGCCGCCGA CGGCCTTTGA CGGGCTCGAT GAAAGCTTTT TATGGGCATT AGATTGCAGT
AAAAAGGCCC TGCTGGATGC GGGTGTGGAT TTAACGGCAC CATTACTTGA GCGCACAGGG
ATTGTAATGG GCACGCTGTC GTTCCCGACC GCAAGCTCCA ATGAACTGTT TTTACCGATT
TACCATCAAG CGGTTGAAAA GGCATTAAAA ACCAAGCTTA ATCTACCCGA ATTTATTCTC
GCGCCCTTCG CCAATGGGTC GATTGCGGGC TCGCAACAGG CCGCCAATGG TGCCATCGCC
CACACGGCGT CTAAATTGTT AAGCGATGCC CTCGGCCTTG GCGGCGCGCA GCTCAGCCTC
GATGCAGCCT GTGCCAGCTC AGTCTATGCC CTTAAATTGG CCTGCGACTA TTTAACCACG
GGCAAGGCAG ATATGATGCT CGCGGGCGCC GTATCGGGCG CCGATCCCTT CTTTATCAAT
ATGGGATTCT CGATTTTCCA CGCCTATCCA GACCATGGGA TTTCGGCGCC TTTCGATAGC
AATAGCAAAG GCTTATTCGC GGGCGAAGGC GCAGGCGTAT TAGTGCTTAA GCGGTTAGAG
GATGCCGAGC GCGATGGCGA TAATATCTAT GCCGTGGTCA GTGGCATTGG CTTATCGAAC
GATGGCAAGG GCCAATTTGT CTTAAGCCCC AACAGTAAGG GCCAAGTGCA AGCCTTCGAG
CGCGCCTATG CCGCCGCTAA CACGCATCCG AGCAATATCG AAGTGATTGA ATGCCATGCC
ACCGGCACGC CGCTGGGGGA TAAGGTTGAA CTCACTTCGA TGGAACGTTT TTTCGAAGAT
AAACTCGGCG GCACTAAGGC GCCGCTGATA GGTTCGGCTA AATCCAACCT TGGGCATTTA
CTCACAGCTG CTGGCATGCC TGGGATCATG AAAATGATCT TCGCCATGCG CTCAGGCCAG
CTACCGGCGA GTATCAACCT CAAGGCGCCG ATTTCATCGC CTAAGGGATT GTTTAGCGGT
AATAATATTC CCACTCAATT GCAGGCTTGG CCCGATAAAA CAGGCAACGA TCGTCGCCAT
GCGGGGGTAT CTGTATTTGG TTTTGGCGGC TGTAATGCCC ATCTATTGTT GGAATCTTAT
CAACCAACAG CGCACAGCGC CGAGAAGCAA GCCAACAAAC CTGTTTATCA GCAGCAAGCA
TTAACCGTTA TCGGCATGGC GTCGCATTTT GGGCCTTTGG CCTCCATCAA TGCGCTGGAT
AAGGCGCTAA TAGCTCAAAC GGATGCCTTT ATCCCGCTGC CACCTAACCG CTGGAAAGGC
TTAGATAAAC ACCCCGATAT CCTTAACCAG TTTGGCCTAA ATCGCGCGCC CAAAGGCGCC
TATATCGAGC AGTTTGACTT CGACTTTTTG CGCTTTAAAG TGCCGCCTAA TGAGGATGAC
AGGCTGATCT CCCAGCAATT GTTGCTGATC AAAGTCGCCG ACGAAGCGAT TCGCGATGCT
AAGTTAACCG CGGGCAGCAA GGTCGCAGTG TTAGTGGCGA TGGAAACCGA GCTTGAGCTG
CACCAATTCC GTGGCCGGGT GAATTTGCAC ACCCAACTTG CAGAGAGCTT AAAGCAGCAA
GGCGTTCACC TCTCCAATGA TGAATACCTT GCCCTCGAAG CCATCGCCAT GGACAGCGTG
CTCGATGCCG CCAAGCTCAA TCAATACACC AGCTTTATTG GCAATATTAT GGCGTCGCGC
ATCGCCTCGC TGTGGGACTT TAATGGTCCG GCGTTTACCA TCTCAGCCGC CGAGCAATCG
GTCGCTCGCT GTATCGATGT GGCGCAAAAC TTACTGTCCC AAGAGGCCCT CGATGGCGTT
GTGATTGCCG CCGTGGATTT AAGCGGCAGT GTTGAACAGG TCATATTGAA AAACGCTCAA
ATCGCCGTTG ATCTCGATGC CAACAGCGCG AATCCACAGT GGAAGGTGGG TGAAGGTGCG
GGCGCTATCG TGCTGACAAA CCAGCAAGCG AGCAACAGTC AACAAGCGAG TAACAGTTCT
CAAAAGGGCT ACGGCCAAAT TCGTGCTCAA GCATTTGGCA CACATCATCA GCTGCCCAAG
CTGCTTGATT CGCTGATAAC CGAAACGGCT ATCGCCAATC CTTCAGTGCC CGCTGCCATC
CATATGGTTG AGCAATGTAT TGCCCCAGAA GAGCAACTGC CAGCGGAGCG GCTATTAACT
CAGCTTAATC TTATGGGGAC GCCATGCAAT CGAGTCGCCA ATACCCTTGG GCATAACTTT
GCTGCCGCGG GTATGGCCAG TCTTTTGAGT GCCCTGTTAA GCCTAAAAAA CGGGTCTGAG
GGTTCGGATA AAAACGCCGA TAAACAGGCA TTAGTGTTTA CCCAAAGCCA AGGAGTGAGC
TCACTGCTGC TGTTAAGCCA AACGGTAACG CAGGCGGAAC AACTAGAACT GCGCCTTGAG
CAGGACTTAA CCTTGAGTGA GCAAAAACAT TTAATCAAAC CAGTCACGCT CGGTGGCCGC
GATATCTATC AACATATTGT GGATACGCCA TTGCCCGCAC TTGCCGCCAT CCAAGGCAAA
ATGCGCCAGT TGCAGCCTGT CGCACCGCAG GCGACACAAA CTGTGCCCAG AGTACAAGCT
GCACTTGATA CCACGGCTGA AAACGCCACC CCATTTGCCA CACCAATAGC AGTAGAGAGC
GGTATGTCAT CTAACGCACC ACACCAATAT TCGGCGGCGC CCTTGGCGCA GGATAGGGCG
TCGCAGGATA GCGCGGCACT GTTACAAAAC CAGCAACTGT TACAAAACCA GCAATTGGCC
CGCGAAGCGC ACCTAGCCTT TTTACAGAGC CGTGAGCAAG GGCTCAAACT GGCCGATGCG
CTGTTAAAAG CGCAATTGTC CCAGACGACA CAAATGGGGT CTGTTGCACC CCATGTTACC
ACCAGCGCGA ATGTCGCTCC CGCTGCGGCG CAGCAAGCTG TACCCGTCCC AGAACTAAAA
CCAGATCACG CGAATGTCGC TCCCTATACG CCACCCATTC CTGCGGCTAA GCCCTGCATT
TGGAACTATC AGGATCTGGT GGAATACGCC GAGGGCGACA TTGCCAAGGT CTTTGGCGCC
GATTACGCCA TTATCGACAG CTACGCACGT CGGGTGCGTC TGCCAACCTC GGATTATCTG
CTAGTCTCGC GGGTGACTAA GCTCAACGCG CAAATGAACC GCTATCAGCC GAGCACTATG
ACCACAGAGT ACGACATTCC CGTGGATGCG CCCTTCTTGG TCGATGGCCA AATTCCGTGG
GCGGTGGCAG TCGAATCGGG CCAGTGCGAC TTAATGCTCA TCAGCTACTT AGGTATCGAT
TTTGAAAACA AAGGCGAGCG CGTCTATCGC TTGCTCGACT GCACCCTCAC CTTCCTTGGG
GACCTGCCCC GCGGAGGTGA CACCCTGCGC TACGATATCT CCATCAACCA CTTTGCCCGC
AATGGCGACA CCCTGCTATT TTTCTTCTCC TACGAATGCT TCGTGGGCGA TAAGCTGATC
CTAAAAATGG ACGGCGGCTG CGCGGGATTC TTTACCGATA AAGAACTGGC CGATGGCAAA
GGGGTGATCC GCACCGAGGC CGAAATTAAG GCAAGAGAGC AGGCACAAAT TGCACTGGCC
AATGAATATG CGCGAAACGG CAAAAAGCCA CGCTTCACGC CGCTACTTAA CTGCGCGCAA
ACGGCTTTCA GCTACGGCCA AATCCATCGT CTACTGAGCG CCGACATTGG CGGCTGTTTC
GGCGGTGAAC ATGCGGCCCA TCAGGCAAAG TTTGGCCTCC AGCCTTCACT GTGCTTCGCC
TCGGAAAAAT TCCTGATGAT CGAGCAAGTC AGTAAACTCG AAGTGCATGG CGGCGCTTGG
GGCTTAGGCT TGATTGAAGG TCACAAACAA TTAGCCCCCG ACCATTGGTA TTTCCCCTGC
CATTTTAAGG GCGACCAAGT GATGGCAGGT TCCCTCATGG CCGAAGGTTG TGGTCAGTTA
CTGCAATTCT TTATGTTGCA TATTGGTATG CACCTTGGGG TGACTAACGG TCGTTTCCAA
CCCCTTGAAA ACGCATCGCA AAAAGTACGC TGCCGCGGTC AGGTATTGCC ACAATCTGGC
ACGCTCACCT ATCGCATGGA AGTCACCGAA ATTGGCATGA GCCCTCGCCC CTATGCCAAG
GCGAATATCG ATATTCTGCT CAATGGCAAA GTGGTGGTGG ATTTCCAAAA CCTCGGGGTG
ATGATTAAAG AAGAAGCGGA TTGCACCCGC TATTCGCAGA GCAGTTTTTC GCAGAGTCAT
TCTTCACAAG GCAATGATTC GCAAGCTGCA AATATCTACA ATCAAGCGGA ACAAGCGCCA
CTGATGGCGC AAATCCCAGA TGTTTCAGCT CCCGTGAATA AAGGCGTTGT GCCGCTTAAG
CATGTAAGCG CGCCGATTGC GCCAGCAGGC TCTAAGTACG CCAACCGCGT GCCCGACACC
CTGCCGTTTA CGCCTTACCA TCTGTTTGAG TTTGCCACCG GCGATATTGA AAACTGCTTC
GGCCCCGATT TTAGTATTTA CCGTGGCTTA ATCCCGCCGC GCACGCCCTG CGGCGATCTG
CAACTCACCA CACGAGTGGT GGCCATTGAG GGCAAACGTG GCGAACTGAA AAAGCCATCC
TCCTGTATTG CCGAGTATGA AGTGCCCAGC AACGCGTGGT ATTACGCTAA AAACAACCAC
CCGAGCGTGA TGCCTTACTC AGTATTGATG GAAATCTCAT TGCAGCCCAA TGGCTTTATC
TCGGGTTATA TGGGCACGAC CTTAGGCTTC CCGGGGCAGG AATTATTCTT CCGCAACCTC
GACGGCAGTG GCAAATTACT GCGCGAAGTG GATTTACGCG GTAAAACCAT AGTCAACGAT
TCGCGCCTGC TGTCCACTGT GATTGCAGGC AGCAATATCA TTCAAAACTT TAGTTTCGAA
CTGAGCTGCG ATGGCGAGCC CTTCTACCGC GGTAATGCGG TTTTCGGTTA CTTTAAGGCC
GATGCGCTTA AAAACCAGTT AGGGATCGAC AATGGTAAAA TTACCCAAGC TTGGCATATT
GAGCGCGGTA TTAAAGCCGA CAGCCAAATC AATCTGTTAG ATAAAAATGG TCGCAGTTTT
GTGGCGCCGC AGGGCAAGCC ACACTACCGC CTTGCGGGTG GTCAGCTGAA CTTTATCGAC
AAGGCCGAGA TAGTAAAAAC TGGCGGTAAG AAGGGGCTGG GATACTTGTA CGCCGAGCGA
ACCATTGACC CGAGCGATTG GTTCTTCCAG TTCCATTTCC ATCAGGATCC TGTAATGCCA
GGCTCCCTCG GCGTCGAGGC GATTATCGAA TTACTGCAAA CCTATGCCAT AGACCAAGAC
CTAGGCGCAA GTTTCAATAA TCCGAAATTT GGCCAAATTC GGTCAGAAAT TAAATGGAAG
TATCGCGGTC AAATTAATCC ATTAAACAAA CAGATGTCGC TGGATGTGCA TATCACCAGC
ATTGAAGATA AAGACGGTAA ACGTATCATT AAGGGCGATG CCAACCTGAG TAAGGATGGC
CTGCGCATTT ATGAGGTAAC CGATATCGCT ATCTGCATCG AAGAGGCATA G
|
|---|
| Protein sequence | MHVHPTQQNS TAVPNDQRQN SKAMPKIAIV GLAVQYPDAD TPEQFWQNLL DKKDSRSQID
AVKLNANPAD YQGVQGQADR FYCDKGGYIR NFRFDPQGYQ LPPTAFDGLD ESFLWALDCS
KKALLDAGVD LTAPLLERTG IVMGTLSFPT ASSNELFLPI YHQAVEKALK TKLNLPEFIL
APFANGSIAG SQQAANGAIA HTASKLLSDA LGLGGAQLSL DAACASSVYA LKLACDYLTT
GKADMMLAGA VSGADPFFIN MGFSIFHAYP DHGISAPFDS NSKGLFAGEG AGVLVLKRLE
DAERDGDNIY AVVSGIGLSN DGKGQFVLSP NSKGQVQAFE RAYAAANTHP SNIEVIECHA
TGTPLGDKVE LTSMERFFED KLGGTKAPLI GSAKSNLGHL LTAAGMPGIM KMIFAMRSGQ
LPASINLKAP ISSPKGLFSG NNIPTQLQAW PDKTGNDRRH AGVSVFGFGG CNAHLLLESY
QPTAHSAEKQ ANKPVYQQQA LTVIGMASHF GPLASINALD KALIAQTDAF IPLPPNRWKG
LDKHPDILNQ FGLNRAPKGA YIEQFDFDFL RFKVPPNEDD RLISQQLLLI KVADEAIRDA
KLTAGSKVAV LVAMETELEL HQFRGRVNLH TQLAESLKQQ GVHLSNDEYL ALEAIAMDSV
LDAAKLNQYT SFIGNIMASR IASLWDFNGP AFTISAAEQS VARCIDVAQN LLSQEALDGV
VIAAVDLSGS VEQVILKNAQ IAVDLDANSA NPQWKVGEGA GAIVLTNQQA SNSQQASNSS
QKGYGQIRAQ AFGTHHQLPK LLDSLITETA IANPSVPAAI HMVEQCIAPE EQLPAERLLT
QLNLMGTPCN RVANTLGHNF AAAGMASLLS ALLSLKNGSE GSDKNADKQA LVFTQSQGVS
SLLLLSQTVT QAEQLELRLE QDLTLSEQKH LIKPVTLGGR DIYQHIVDTP LPALAAIQGK
MRQLQPVAPQ ATQTVPRVQA ALDTTAENAT PFATPIAVES GMSSNAPHQY SAAPLAQDRA
SQDSAALLQN QQLLQNQQLA REAHLAFLQS REQGLKLADA LLKAQLSQTT QMGSVAPHVT
TSANVAPAAA QQAVPVPELK PDHANVAPYT PPIPAAKPCI WNYQDLVEYA EGDIAKVFGA
DYAIIDSYAR RVRLPTSDYL LVSRVTKLNA QMNRYQPSTM TTEYDIPVDA PFLVDGQIPW
AVAVESGQCD LMLISYLGID FENKGERVYR LLDCTLTFLG DLPRGGDTLR YDISINHFAR
NGDTLLFFFS YECFVGDKLI LKMDGGCAGF FTDKELADGK GVIRTEAEIK AREQAQIALA
NEYARNGKKP RFTPLLNCAQ TAFSYGQIHR LLSADIGGCF GGEHAAHQAK FGLQPSLCFA
SEKFLMIEQV SKLEVHGGAW GLGLIEGHKQ LAPDHWYFPC HFKGDQVMAG SLMAEGCGQL
LQFFMLHIGM HLGVTNGRFQ PLENASQKVR CRGQVLPQSG TLTYRMEVTE IGMSPRPYAK
ANIDILLNGK VVVDFQNLGV MIKEEADCTR YSQSSFSQSH SSQGNDSQAA NIYNQAEQAP
LMAQIPDVSA PVNKGVVPLK HVSAPIAPAG SKYANRVPDT LPFTPYHLFE FATGDIENCF
GPDFSIYRGL IPPRTPCGDL QLTTRVVAIE GKRGELKKPS SCIAEYEVPS NAWYYAKNNH
PSVMPYSVLM EISLQPNGFI SGYMGTTLGF PGQELFFRNL DGSGKLLREV DLRGKTIVND
SRLLSTVIAG SNIIQNFSFE LSCDGEPFYR GNAVFGYFKA DALKNQLGID NGKITQAWHI
ERGIKADSQI NLLDKNGRSF VAPQGKPHYR LAGGQLNFID KAEIVKTGGK KGLGYLYAER
TIDPSDWFFQ FHFHQDPVMP GSLGVEAIIE LLQTYAIDQD LGASFNNPKF GQIRSEIKWK
YRGQINPLNK QMSLDVHITS IEDKDGKRII KGDANLSKDG LRIYEVTDIA ICIEEA
|
|---|
| |